Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, Fourcade, H Matthew, Boore, Jeffrey L, Jansen, Robert K

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Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns von Jansen, Robert K, Cai, Zhengqiu, Raubeson, Linda A, Daniell, Henry, dePamphilis, Claude W, Leebens-Mack, James, Müller, Kai F, Guisinger-Bellian, Mary, Haberle, Rosemarie C, Hansen, Anne K, Chumley, Timothy W, Lee, Seung-Bum, Peery, Rhiannon, McNeal, Joel R, Kuehl, Jennifer V, Boore, Jeffrey L

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Methods for Obtaining and Analyzing Whole Chloroplast Genome Sequences von Jansen, Robert K., Raubeson, Linda A., Boore, Jeffrey L., dePamphilis, Claude W., Chumley, Timothy W., Haberle, Rosemarie C., Wyman, Stacia K., Alverson, Andrew J., Peery, Rhiannon, Herman, Sallie J., Fourcade, H.Matthew, Kuehl, Jennifer V., McNeal, Joel R., Leebens-Mack, James, Cui, Liying

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The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates von McCoy, Skip R, Kuehl, Jennifer V, Boore, Jeffrey L, Raubeson, Linda A

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Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling one's way out of the Felsenstein zone von Leebens-Mack, Jim, Raubeson, Linda A, Cui, Liying, Kuehl, Jennifer V, Fourcade, Matthew H, Chumley, Timothy W, Boore, Jeffrey L, Jansen, Robert K, depamphilis, Claude W

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Chloroplast DNA rearrangements in Campanulaceae: phylogenetic utility of highly rearranged genomes von Cosner, Mary E, Raubeson, Linda A, Jansen, Robert K

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Does complete plastid genome sequencing improve species discrimination and phylogenetic resolution in Araucaria? von Ruhsam, Markus, Rai, Hardeep S., Mathews, Sarah, Ross, T. Gregory, Graham, Sean W., Raubeson, Linda A., Mei, Wenbin, Thomas, Philip I., Gardner, Martin F., Ennos, Richard A., Hollingsworth, Peter M.

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Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants von Raubeson, L.A. (Mount Holyoke College, South Hadley, MA), Jansen, R.K

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Distance-based genome rearrangement phylogeny von Wang, Li-San, Warnow, Tandy, Moret, Bernard M E, Jansen, Robert K, Raubeson, Linda A

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A rare chloroplast-DNA structural mutation is shared by all conifers von Raubeson, Linda A., Jansen, Robert K.

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Insights into Fern Evolution from Mapping Chloroplast Genomes von Raubeson, Linda A., Stein, Diana B.

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The Relationships of Papuasian Cyatheaceae to New World Tree Ferns von Conant, David S., Raubeson, Linda A., Attwood, Deborah K., Stein, Diana B.

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Upper Cretaceous Conifer Leaf Fossils from the Black Creek Formation with an Assessment of Affinities Using Principal Components Analysis von Raubeson, Linda A, Gensel, Patricia G

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chlL (frxC) gene: phylogenetic distribution in vascular plants and DNA sequence from Polystichum acrostichoides (Pteridophyta) and Synechococcus sp. 7002 (Cyanobacteria) von Burke, D.H, Raubeson, L.A, Alberti, M, Hearst, J.E, Jordan, E.T, Kirch, S.A, Valinski, A.E.C, Conant, D.S, Stein, D.B

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Scatter plots showing relationships between aspects of SSR frequency and other characteristics von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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Sequence similarity comparisons of IGS and introns within the IR and the LSC von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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The number of SDRs of different length classes found in eight different angiosperm plastid genomes von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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Comparison of inverted repeat-single copy boundaries in six representative angiosperms von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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Graphical analyses of codon usage patterns von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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Circular plastome map von Raubeson, Linda A, Peery, Rhiannon, Chumley, Timothy W, Dziubek, Chris, H Matthew Fourcade, Boore, Jeffrey L, Jansen, Robert K

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