The UCSC Genome Browser database: 2023 update von Nassar, Luis R, Barber, Galt P, Benet-Pagès, Anna, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Fischer, Clay, Gonzalez, Jairo Navarro, Hinrichs, Angie S, Lee, Brian T, Lee, Christopher M, Muthuraman, Pranav, Nguy, Beagan, Pereira, Tiana, Nejad, Parisa, Perez, Gerardo, Raney, Brian J, Schmelter, Daniel, Speir, Matthew L, Wick, Brittney D, Zweig, Ann S, Haussler, David, Kuhn, Robert M, Haeussler, Maximilian, Kent, W James

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The UCSC Genome Browser database: 2022 update von Lee, Brian T, Barber, Galt P, Benet-Pagès, Anna, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Fischer, Clay, Gonzalez, Jairo Navarro, Hinrichs, Angie S, Lee, Christopher M, Muthuraman, Pranav, Nassar, Luis R, Nguy, Beagan, Pereira, Tiana, Perez, Gerardo, Raney, Brian J, Rosenbloom, Kate R, Schmelter, Daniel, Speir, Matthew L, Wick, Brittney D, Zweig, Ann S, Haussler, David, Kuhn, Robert M, Haeussler, Maximilian, Kent, W James

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The UCSC Genome Browser database: 2021 update von Navarro Gonzalez, Jairo, Zweig, Ann S, Speir, Matthew L, Schmelter, Daniel, Rosenbloom, Kate R, Raney, Brian J, Powell, Conner C, Nassar, Luis R, Maulding, Nathan D, Lee, Christopher M, Lee, Brian T, Hinrichs, Angie S, Fyfe, Alastair C, Fernandes, Jason D, Diekhans, Mark, Clawson, Hiram, Casper, Jonathan, Benet-Pagès, Anna, Barber, Galt P, Haussler, David, Kuhn, Robert M, Haeussler, Maximilian, Kent, W James

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The UCSC Genome Browser database: 2018 update von Casper, Jonathan, Zweig, Ann S, Villarreal, Chris, Tyner, Cath, Speir, Matthew L, Rosenbloom, Kate R, Raney, Brian J, Lee, Christopher M, Lee, Brian T, Karolchik, Donna, Hinrichs, Angie S, Haeussler, Maximilian, Guruvadoo, Luvina, Navarro Gonzalez, Jairo, Gibson, David, Fiddes, Ian T, Eisenhart, Christopher, Diekhans, Mark, Clawson, Hiram, Barber, Galt P, Armstrong, Joel, Haussler, David, Kuhn, Robert M, Kent, W James

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UCSC Genome Browser enters 20th year von Lee, Christopher M, Barber, Galt P, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Gonzalez, Jairo Navarro, Hinrichs, Angie S, Lee, Brian T, Nassar, Luis R, Powell, Conner C, Raney, Brian J, Rosenbloom, Kate R, Schmelter, Daniel, Speir, Matthew L, Zweig, Ann S, Haussler, David, Haeussler, Maximilian, Kuhn, Robert M, Kent, W James

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Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser von Raney, Brian J, Dreszer, Timothy R, Barber, Galt P, Clawson, Hiram, Fujita, Pauline A, Wang, Ting, Nguyen, Ngan, Paten, Benedict, Zweig, Ann S, Karolchik, Donna, Kent, W James

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The UCSC Genome Browser database: extensions and updates 2013 von Meyer, Laurence R, Zweig, Ann S, Hinrichs, Angie S, Karolchik, Donna, Kuhn, Robert M, Wong, Matthew, Sloan, Cricket A, Rosenbloom, Kate R, Roe, Greg, Rhead, Brooke, Raney, Brian J, Pohl, Andy, Malladi, Venkat S, Li, Chin H, Lee, Brian T, Learned, Katrina, Kirkup, Vanessa, Hsu, Fan, Heitner, Steve, Harte, Rachel A, Haeussler, Maximilian, Guruvadoo, Luvina, Goldman, Mary, Giardine, Belinda M, Fujita, Pauline A, Dreszer, Timothy R, Diekhans, Mark, Cline, Melissa S, Clawson, Hiram, Barber, Galt P, Haussler, David, Kent, W James

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The UCSC Genome Browser database: 2024 update von Raney, Brian J, Barber, Galt P, Benet-Pagès, Anna, Casper, Jonathan, Clawson, Hiram, Cline, Melissa S, Diekhans, Mark, Fischer, Clayton, Navarro Gonzalez, Jairo, Hickey, Glenn, Hinrichs, Angie S, Kuhn, Robert M, Lee, Brian T, Lee, Christopher M, Le Mercier, Phillipe, Miga, Karen H, Nassar, Luis R, Nejad, Parisa, Paten, Benedict, Perez, Gerardo, Schmelter, Daniel, Speir, Matthew L, Wick, Brittney D, Zweig, Ann S, Haussler, David, Kent, W James, Haeussler, Maximilian

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The UCSC Genome Browser database: 2025 update von Perez, Gerardo, Barber, Galt P, Benet-Pages, Anna, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Fischer, Clay, Gonzalez, Jairo Navarro, Hinrichs, Angie S, Lee, Christopher M, Nassar, Luis R, Raney, Brian J, Speir, Matthew L, van Baren, Marijke J, Vaske, Charles J, Haussler, David, Kent, W James, Haeussler, Maximilian

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GenArk: towards a million UCSC genome browsers von Clawson, Hiram, Lee, Brian T, Raney, Brian J, Barber, Galt P, Casper, Jonathan, Diekhans, Mark, Fischer, Clay, Gonzalez, Jairo Navarro, Hinrichs, Angie S, Lee, Christopher M, Nassar, Luis R, Perez, Gerardo, Wick, Brittney, Schmelter, Daniel, Speir, Matthew L, Armstrong, Joel, Zweig, Ann S, Kuhn, Robert M, Kirilenko, Bogdan M, Hiller, Michael, Haussler, David, Kent, W James, Haeussler, Maximilian

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Alignathon: a competitive assessment of whole-genome alignment methods von Earl, Dent, Nguyen, Ngan, Hickey, Glenn, Harris, Robert S, Fitzgerald, Stephen, Beal, Kathryn, Seledtsov, Igor, Molodtsov, Vladimir, Raney, Brian J, Clawson, Hiram, Kim, Jaebum, Kemena, Carsten, Chang, Jia-Ming, Erb, Ionas, Poliakov, Alexander, Hou, Minmei, Herrero, Javier, Kent, William James, Solovyev, Victor, Darling, Aaron E, Ma, Jian, Notredame, Cedric, Brudno, Michael, Dubchak, Inna, Haussler, David, Paten, Benedict

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Reconstructing contiguous regions of an ancestral genome von Ma, Jian, Zhang, Louxin, Suh, Bernard B, Raney, Brian J, Burhans, Richard C, Kent, W James, Blanchette, Mathieu, Haussler, David, Miller, Webb

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The UCSC Genome Browser database: 2019 update von Haeussler, Maximilian, Zweig, Ann S, Tyner, Cath, Speir, Matthew L, Rosenbloom, Kate R, Raney, Brian J, Lee, Christopher M, Lee, Brian T, Hinrichs, Angie S, Gonzalez, Jairo Navarro, Gibson, David, Diekhans, Mark, Clawson, Hiram, Casper, Jonathan, Barber, Galt P, Haussler, David, Kuhn, Robert M, Kent, W James

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infinite sites model of genome evolution von Ma, Jian, Ratan, Aakrosh, Raney, Brian J, Suh, Bernard B, Miller, Webb, Haussler, David

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UCSC Cell Browser: visualize your single-cell data von Speir, Matthew L, Bhaduri, Aparna, Markov, Nikolay S, Moreno, Pablo, Nowakowski, Tomasz J, Papatheodorou, Irene, Pollen, Alex A, Raney, Brian J, Seninge, Lucas, Kent, W James, Haeussler, Maximilian

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Comparative assembly hubs: web-accessible browsers for comparative genomics von Nguyen, Ngan, Hickey, Glenn, Raney, Brian J, Armstrong, Joel, Clawson, Hiram, Zweig, Ann, Karolchik, Donna, Kent, William James, Haussler, David, Paten, Benedict

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Chromosome assembly of large and complex genomes using multiple references von Kolmogorov, Mikhail, Armstrong, Joel, Raney, Brian J, Streeter, Ian, Dunn, Matthew, Yang, Fengtang, Odom, Duncan, Flicek, Paul, Keane, Thomas M, Thybert, David, Paten, Benedict, Pham, Son

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The UCSC Genome Browser database: 2017 update von Tyner, Cath, Barber, Galt P, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Eisenhart, Christopher, Fischer, Clayton M, Gibson, David, Gonzalez, Jairo Navarro, Guruvadoo, Luvina, Haeussler, Maximilian, Heitner, Steve, Hinrichs, Angie S, Karolchik, Donna, Lee, Brian T, Lee, Christopher M, Nejad, Parisa, Raney, Brian J, Rosenbloom, Kate R, Speir, Matthew L, Villarreal, Chris, Vivian, John, Zweig, Ann S, Haussler, David, Kuhn, Robert M, Kent, W James

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The UCSC Genome Browser database: 2016 update von Speir, Matthew L, Zweig, Ann S, Rosenbloom, Kate R, Raney, Brian J, Paten, Benedict, Nejad, Parisa, Lee, Brian T, Learned, Katrina, Karolchik, Donna, Hinrichs, Angie S, Heitner, Steve, Harte, Rachel A, Haeussler, Maximilian, Guruvadoo, Luvina, Fujita, Pauline A, Eisenhart, Christopher, Diekhans, Mark, Clawson, Hiram, Casper, Jonathan, Barber, Galt P, Haussler, David, Kuhn, Robert M, Kent, W James

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The UCSC Genome Browser database: 2015 update von Rosenbloom, Kate R, Armstrong, Joel, Barber, Galt P, Casper, Jonathan, Clawson, Hiram, Diekhans, Mark, Dreszer, Timothy R, Fujita, Pauline A, Guruvadoo, Luvina, Haeussler, Maximilian, Harte, Rachel A, Heitner, Steve, Hickey, Glenn, Hinrichs, Angie S, Hubley, Robert, Karolchik, Donna, Learned, Katrina, Lee, Brian T, Li, Chin H, Miga, Karen H, Nguyen, Ngan, Paten, Benedict, Raney, Brian J, Smit, Arian F A, Speir, Matthew L, Zweig, Ann S, Haussler, David, Kuhn, Robert M, Kent, W James

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