Discovery of candidate KEN-box motifs using Cell Cycle keyword enrichment combined with native disorder prediction and motif conservation von Michael, Sushama, Travé, Gilles, Ramu, Chenna, Chica, Claudia, Gibson, Toby J.

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KEPE—a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors von Diella, Francesca, Chabanis, Sophie, Luck, Katja, Chica, Claudia, Ramu, Chenna, Nerlov, Claus, Gibson, Toby J.

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SIRW: a web server for the Simple Indexing and Retrieval System that combines sequence motif searches with keyword searches von Ramu, Chenna

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Ortho2ExpressMatrix--a web server that interprets cross-species gene expression data by gene family information von Meinel, Thomas, Schweiger, Michal R, Ludewig, Andreas H, Chenna, Ramu, Krobitsch, Sylvia, Herwig, Ralf

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Multiple sequence alignment with the Clustal series of programs von Chenna, Ramu, Sugawara, Hideaki, Koike, Tadashi, Lopez, Rodrigo, Gibson, Toby J., Higgins, Desmond G., Thompson, Julie D.

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SIR: a simple indexing and retrieval system for biological flat file databases von RAMU, Chenna

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The APECED polyglandular autoimmune syndrome protein, AIRE-1, contains the SAND domain and is probably a transcription factor von Gibson, Toby J, Ramu, Chenna, Gemünd, Christine, Aasland, Rein

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Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries von Gemünd, C, Ramu, C, Altenberg-Greulich, B, Gibson, T J

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A high-throughput siRNA screen identifies genes that regulate mannose 6-phosphate receptor trafficking von Anitei, Mihaela, Chenna, Ramu, Czupalla, Cornelia, Esner, Milan, Christ, Sara, Lenhard, Steffi, Korn, Kerstin, Meyenhofer, Felix, Bickle, Marc, Zerial, Marino, Hoflack, Bernard

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Hes3 Is Expressed in the Adult Pancreatic Islet and Regulates Gene Expression, Cell Growth, and Insulin Release von Masjkur, Jimmy, Arps-Forker, Carina, Poser, Steven W., Nikolakopoulou, Polyxeni, Toutouna, Louiza, Chenna, Ramu, Chavakis, Triantafyllos, Chatzigeorgiou, Antonios, Chen, Lan-Sun, Dubrovska, Anna, Choudhary, Pratik, Uphues, Ingo, Mark, Michael, Bornstein, Stefan R., Androutsellis-Theotokis, Andreas

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Object-oriented parsing of biological databases with Python von Ramu, Chenna, Gemünd, Christine, Gibson, Toby J.

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Targeted isolation of cloned genomic regions by recombineering for haplotype phasing and isogenic targeting von Nedelkova, Marta, Maresca, Marcello, Fu, Jun, Rostovskaya, Maria, Chenna, Ramu, Thiede, Christian, Anastassiadis, Konstantinos, Sarov, Mihail, Stewart, A. Francis

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ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins von Puntervoll, Pål, Linding, Rune, Gemünd, Christine, Chabanis-Davidson, Sophie, Mattingsdal, Morten, Cameron, Scott, Martin, David M. A., Ausiello, Gabriele, Brannetti, Barbara, Costantini, Anna, Ferrè, Fabrizio, Maselli, Vincenza, Via, Allegra, Cesareni, Gianni, Diella, Francesca, Superti-Furga, Giulio, Wyrwicz, Lucjan, Ramu, Chenna, McGuigan, Caroline, Gudavalli, Rambabu, Letunic, Ivica, Bork, Peer, Rychlewski, Leszek, Küster, Bernhard, Helmer-Citterich, Manuela, Hunter, William N., Aasland, Rein, Gibson, Toby J.

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