Ontology mapping for semantically enabled applications von Harrow, Ian, Balakrishnan, Rama, Jimenez-Ruiz, Ernesto, Jupp, Simon, Lomax, Jane, Reed, Jane, Romacker, Martin, Senger, Christian, Splendiani, Andrea, Wilson, Jabe, Woollard, Peter

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YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit von Balakrishnan, Rama, Park, Julie, Karra, Kalpana, Hitz, Benjamin C, Binkley, Gail, Hong, Eurie L, Sullivan, Julie, Micklem, Gos, Cherry, J Michael

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Active Interaction Mapping Reveals the Hierarchical Organization of Autophagy von Kramer, Michael H., Farré, Jean-Claude, Mitra, Koyel, Yu, Michael Ku, Ono, Keiichiro, Demchak, Barry, Licon, Katherine, Flagg, Mitchell, Balakrishnan, Rama, Cherry, J. Michael, Subramani, Suresh, Ideker, Trey

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Cross-organism analysis using InterMine von Lyne, Rachel, Sullivan, Julie, Butano, Daniela, Contrino, Sergio, Heimbach, Joshua, Hu, Fengyuan, Kalderimis, Alex, Lyne, Mike, N. Smith, Richard, Štěpán, Radek, Balakrishnan, Rama, Binkley, Gail, Harris, Todd, Karra, Kalpana, A. T. Moxon, Sierra, Motenko, Howie, Neuhauser, Steven, Ruzicka, Leyla, Cherry, Mike, Richardson, Joel, Stein, Lincoln, Westerfield, Monte, Worthey, Elizabeth, Micklem, Gos

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Guidelines for the functional annotation of microRNAs using the Gene Ontology von Huntley, Rachael P, Sitnikov, Dmitry, Orlic-Milacic, Marija, Balakrishnan, Rama, D'Eustachio, Peter, Gillespie, Marc E, Howe, Doug, Kalea, Anastasia Z, Maegdefessel, Lars, Osumi-Sutherland, David, Petri, Victoria, Smith, Jennifer R, Van Auken, Kimberly, Wood, Valerie, Zampetaki, Anna, Mayr, Manuel, Lovering, Ruth C

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Bioassay protocol metadata annotation: Proposed standards adoption von Balakrishnan, Rama, Berg, Ellen L., Butler, Christopher C., Clark, Alex M., Denker, Sheryl P., Feierberg, Isabella, Harris, Jason, Ikeda, Timothy P., Jeschonek, Samantha, Makarov, Vladimir A., Southan, Christopher, Vanderwall, Dana, Winstanley, Peter

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InterMOD: integrated data and tools for the unification of model organism research von Sullivan, Julie, Karra, Kalpana, Moxon, Sierra A. T., Vallejos, Andrew, Motenko, Howie, Wong, J. D., Aleksic, Jelena, Balakrishnan, Rama, Binkley, Gail, Harris, Todd, Hitz, Benjamin, Jayaraman, Pushkala, Lyne, Rachel, Neuhauser, Steven, Pich, Christian, Smith, Richard N., Trinh, Quang, Cherry, J. Michael, Richardson, Joel, Stein, Lincoln, Twigger, Simon, Westerfield, Monte, Worthey, Elizabeth, Micklem, Gos

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AmiGO: online access to ontology and annotation data von Carbon, Seth, Ireland, Amelia, Mungall, Christopher J., Shu, ShengQiang, Marshall, Brad, Lewis, Suzanna

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Maximizing data value for biopharma through FAIR and quality implementation: FAIR plus Q von Harrow, Ian, Balakrishnan, Rama, Küçük McGinty, Hande, Plasterer, Tom, Romacker, Martin

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Saccharomyces Genome Database: the genomics resource of budding yeast von Cherry, J. Michael, Hong, Eurie L., Amundsen, Craig, Balakrishnan, Rama, Binkley, Gail, Chan, Esther T., Christie, Karen R., Costanzo, Maria C., Dwight, Selina S., Engel, Stacia R., Fisk, Dianna G., Hirschman, Jodi E., Hitz, Benjamin C., Karra, Kalpana, Krieger, Cynthia J., Miyasato, Stuart R., Nash, Rob S., Park, Julie, Skrzypek, Marek S., Simison, Matt, Weng, Shuai, Wong, Edith D.

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A gene ontology inferred from molecular networks von Dutkowski, Janusz, Kramer, Michael, Surma, Michal A, Balakrishnan, Rama, Cherry, J Michael, Krogan, Nevan J, Ideker, Trey

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The reference genome sequence of Saccharomyces cerevisiae: then and now von Engel, Stacia R, Dietrich, Fred S, Fisk, Dianna G, Binkley, Gail, Balakrishnan, Rama, Costanzo, Maria C, Dwight, Selina S, Hitz, Benjamin C, Karra, Kalpana, Nash, Robert S, Weng, Shuai, Wong, Edith D, Lloyd, Paul, Skrzypek, Marek S, Miyasato, Stuart R, Simison, Matt, Cherry, J Michael

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Conference report: Biocuration 2021 Virtual Conference von Quaglia, Federica, Balakrishnan, Rama, Bello, Susan M, Vasilevsky, Nicole

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Biocuration: Distilling data into knowledge von International Society for Biocuration

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A guide to best practices for Gene Ontology (GO) manual annotation von Balakrishnan, Rama, Harris, Midori A, Huntley, Rachael, Van Auken, Kimberly, Cherry, J Michael

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The Gene Ontology project in 2008 von [Anon.]

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Gene Ontology annotations at SGD: new data sources and annotation methods von Hong, Eurie L, Balakrishnan, Rama, Dong, Qing, Christie, Karen R, Park, Julie, Binkley, Gail, Costanzo, Maria C, Dwight, Selina S, Engel, Stacia R, Fisk, Dianna G, Hirschman, Jodi E, Hitz, Benjamin C, Krieger, Cynthia J, Livstone, Michael S, Miyasato, Stuart R, Nash, Robert S, Oughtred, Rose, Skrzypek, Marek S, Weng, Shuai, Wong, Edith D, Zhu, Kathy K, Dolinski, Kara, Botstein, David, Cherry, J. Michael

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Standardized description of scientific evidence using the Evidence Ontology (ECO) von Chibucos, Marcus C, Mungall, Christopher J, Balakrishnan, Rama, Christie, Karen R, Huntley, Rachael P, White, Owen, Blake, Judith A, Lewis, Suzanna E, Giglio, Michelle

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Recapitulation of Prognostic Mutational Subtyping Utilizing F1H in GOYA and CAVALLI and the Potential to Highlight Benefit of Targeted Therapy in De Novo DLBCL von Kim, Eugene C, Fan, Jinzhen, Bolen, Christopher R, Bazeos, Alexandra, Jiang, Yanwen, Balasubramanian, Sandhya, Balakrishnan, Rama, Knapp, Andrea, Humphrey, Kathryn, Nielsen, Tina G, Venstrom, Jeffrey M., Hernandez, Genevive, Paulson, Joseph N

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Comparison of computationally- and manually-assigned Gene Ontology annotations to improve functional characterization of gene products von Costanzo, Maria, Balakrishnan, Rama, Christie, Karen, Hog, Eurie, Park, Julie, Cherry, J. Michael

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