The multidimensional mechanisms of long noncoding RNA function von Marchese, Francesco P, Raimondi, Ivan, Huarte, Maite

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Nanobody-tethered transposition enables multifactorial chromatin profiling at single-cell resolution von Stuart, Tim, Hao, Stephanie, Zhang, Bingjie, Mekerishvili, Levan, Landau, Dan A., Maniatis, Silas, Satija, Rahul, Raimondi, Ivan

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The human lncRNA LINC-PINT inhibits tumor cell invasion through a highly conserved sequence element von Marín-Béjar, Oskar, Mas, Aina M, González, Jovanna, Martinez, Dannys, Athie, Alejandro, Morales, Xabier, Galduroz, Mikel, Raimondi, Ivan, Grossi, Elena, Guo, Shuling, Rouzaut, Ana, Ulitsky, Igor, Huarte, Maite

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A lncRNA-SWI/SNF complex crosstalk controls transcriptional activation at specific promoter regions von Grossi, Elena, Raimondi, Ivan, Goñi, Enrique, González, Jovanna, Marchese, Francesco P., Chapaprieta, Vicente, Martín-Subero, José I., Guo, Shuling, Huarte, Maite

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The Ribonucleic Complex HuR-MALAT1 Represses CD133 Expression and Suppresses Epithelial-Mesenchymal Transition in Breast Cancer von Latorre, Elisa, Carelli, Stephana, Raimondi, Ivan, D'Agostino, Vito, Castiglioni, Ilaria, Zucal, Chiara, Moro, Giacomina, Luciani, Andrea, Ghilardi, Giorgio, Monti, Eleonora, Inga, Alberto, Di Giulio, Anna Maria, Gorio, Alfredo, Provenzani, Alessandro

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Multiplexed mapping of chromatin features at single-cell resolution

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The structure formed by inverted repeats in p53 response elements determines the transactivation activity of p53 protein von Brázda, Václav, Čechová, Jana, Battistin, Michele, Coufal, Jan, Jagelská, Eva B., Raimondi, Ivan, Inga, Alberto

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Evolution of p53 transactivation specificity through the lens of a yeast-based functional assay von Lion, Mattia, Raimondi, Ivan, Donati, Stefano, Jousson, Olivier, Ciribilli, Yari, Inga, Alberto

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P53 family members modulate the expression of PRODH, but not PRODH2, via intronic p53 response elements von Raimondi, Ivan, Ciribilli, Yari, Monti, Paola, Bisio, Alessandra, Pollegioni, Loredano, Fronza, Gilberto, Inga, Alberto, Campomenosi, Paola

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Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro von Zhang, Bingjie, Srivastava, Avi, Mimitou, Eleni, Stuart, Tim, Raimondi, Ivan, Hao, Yuhan, Smibert, Peter, Satija, Rahul

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Noncoding RNAs as effective markers in cancer-care management von Raimondi, Ivan, Huarte, Maite

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A IncRNA-SWI/SNF complex crosstalk controls transcriptional activation at specific promoter regions von Grossi, Elena, Raimondi, Ivan, Goni, Enrique, Gonzalez, Jovanna, Marchese, Francesco P., Chapaprieta, Vicente, Martin-Subero, Jose, Guo, Shuling, Huarte, Maite

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YTHDC1 m6A-dependent and m6A-independent functions converge to preserve the DNA damage response von Elvira-Blázquez, Daniel, Fernández-Justel, José Miguel, Arcas, Aida, Statello, Luisa, Goñi, Enrique, González, Jovanna, Ricci, Benedetta, Zaccara, Sara, Raimondi, Ivan, Huarte, Maite

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Analysis of copy number alterations reveals the lncRNA ALAL-1 as a regulator of lung cancer immune evasion von Athie, Alejandro, Marchese, Francesco P., Gonzalez, Jovanna, Lozano, Teresa, Raimondi, Ivan, Juvvuna, Prasanna Kumar, Abad, Amaya, Marin-Bejar, Oskar, Serizay, Jacques, Martinez, Dannys, Ajona, Daniel, Pajares, Maria Jose, Sandoval, Juan, Montuenga, Luis M., Kanduri, Chandrasekhar, Lasarte, Juan J., Huarte, Maite

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A Long Noncoding RNA Regulates Sister Chromatid Cohesion von Marchese, Francesco P., Grossi, Elena, Marín-Béjar, Oskar, Bharti, Sanjay Kumar, Raimondi, Ivan, González, Jovanna, Martínez-Herrera, Dannys Jorge, Athie, Alejandro, Amadoz, Alicia, Brosh, Robert M., Huarte, Maite

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Subcellular Distribution of p53 by the p53-Responsive lncRNA NBAT1 Determines Chemotherapeutic Response in Neuroblastoma von Mitra, Sanhita, Muralidharan, Somsundar Veppil, Di Marco, Mirco, Juvvuna, Prasanna Kumar, Kosalai, Subazini Thankaswamy, Reischl, Silke, Jachimowicz, Daniel, Subhash, Santhilal, Raimondi, Ivan, Kurian, Leo, Huarte, Maite, Kogner, Per, Fischer, Matthias, Johnsen, John Inge, Mondal, Tanmoy, Kanduri, Chandrasekhar

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Efficient and safe therapeutic use of paired Cas9-nickases for primary hyperoxaluria type 1 von Torella, Laura, Klermund, Julia, Bilbao-Arribas, Martin, Tamayo, Ibon, Andrieux, Geoffroy, Chmielewski, Kay O, Vales, Africa, Olagüe, Cristina, Moreno-Luqui, Daniel, Raimondi, Ivan, Abad, Amaya, Torrens-Baile, Julen, Salido, Eduardo, Huarte, Maite, Hernaez, Mikel, Boerries, Melanie, Cathomen, Toni, Zabaleta, Nerea, Gonzalez-Aseguinolaza, Gloria

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Analysis of copy number alterations reveals the lncRNA ALAL-1 as a regulator of lung cancer immune evasion von Athie, Alejandro, Marchese, Francesco P, Gonzalez, Jovanna, Lozano, Teresa, Raimondi, Ivan, Juvvuna, Prasanna Kumar, Abad, Amaya, Marin-Bejar, Oskar, Serizay, Jacques, Martinez, Dannys, Ajona, Daniel, Pajares, Maria Jose, Sandoval, Juan, Montuenga, Luis M, Kanduri, Chandrasekhar, Lasarte, Juan J, Huarte, Maite

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YTHDC1 m 6 A-dependent and m 6 A-independent functions converge to preserve the DNA damage response von Elvira-Blázquez, Daniel, Fernández-Justel, José Miguel, Arcas, Aida, Statello, Luisa, Goñi, Enrique, González, Jovanna, Ricci, Benedetta, Zaccara, Sara, Raimondi, Ivan, Huarte, Maite

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Pooled CRISPR screens with joint single-nucleus chromatin accessibility and transcriptome profiling von Yan, Rachel E, Corman, Alba, Katgara, Lyla, Wang, Xiao, Xue, Xinhe, Gajic, Zoran Z, Sam, Richard, Farid, Michael, Friedman, Samuel M, Choo, Jungwook, Raimondi, Ivan, Ganesan, Shridar, Katsevich, Eugene, Greenfield, Jeffrey P, Dahmane, Nadia, Sanjana, Neville E

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