Navigating highly homologous genes in a molecular diagnostic setting: a resource for clinical next-generation sequencing von Mandelker, Diana, Schmidt, Ryan J., Ankala, Arunkanth, McDonald Gibson, Kristin, Bowser, Mark, Sharma, Himanshu, Duffy, Elizabeth, Hegde, Madhuri, Santani, Avni, Lebo, Matthew, Funke, Birgit

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Contamination Assessment for Cancer Next-Generation Sequencing: Method Development and Clinical Implementation von Li, Yvonne Y, Schmidt, Ryan J, Manning, Danielle K, Jia, Yonghui, Dong, Fei

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A Novel TEK::GAB2 Gene Fusion in Pediatric Angiosarcoma of Pelvic soft Tissue: A Case Report and Literature Review von Sandoval, Zachary Emmanuel, Schmidt, Ryan J, Bhutada, Jessica Sheth, Shillingford, Nick, Zhou, Shengmei

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Expanding the spectrum of dicer1-associated sarcomas von Warren, Mikako, Hiemenz, Matthew C., Schmidt, Ryan, Shows, Jared, Cotter, Jennifer, Toll, Stephanie, Parham, David M., Biegel, Jaclyn A., Mascarenhas, Leo, Shah, Rachana

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Hidden Cargo: The Impact of Historical Shipping Trade on the Recent-Past and Contemporary Non-Native Flora of Northeastern United States von Schmidt, Ryan J, King, Megan R, Aronson, Myla Fj, Struwe, Lena

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Transcriptome Sequencing Allows Comprehensive Genomic Characterization of Pediatric B-Acute Lymphoblastic Leukemia in an Academic Clinical Laboratory von Hu, Zunsong, Kovach, Alexandra E, Yellapantula, Venkata, Ostrow, Dejerianne, Doan, Andrew, Ji, Jianling, Schmidt, Ryan J, Gu, Zhaohui, Bhojwani, Deepa, Raca, Gordana

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PLAG1 Immunohistochemical Staining Is a Surrogate Marker for PLAG1 Fusions in Lipoblastomas von Warren, Mikako, Tiwari, Nishant, Sy, Sabrina, Raca, Gordana, Schmidt, Ryan J, Pawel, Bruce

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A Primer on Gene Editing: What Does It Mean for Pathologists? von Cushman-Vokoun, Allison, Schmidt, Ryan J, Hiemenz, Matthew Charles, Fung, Mark, Zhang, Bing Melody, Bradshaw, Georganne, Gandhi, Manish, Yao, JinJuan, Yohe, Sophia, Beckman, Amy, Grody, Wayne W, Giannikopoulos, Petros

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Development of a Body of Knowledge for the Clinical Bioinformatician: Perspectives from the Association for Molecular Pathology's Clinical Genomics Bioinformatician Body of Knowled... von Roy, Somak, Fussell, Amber, Jordan, Danielle, Kadri, Sabah, Leon, Annette, Schmidt, Ryan J., Temple-Smolkin, Robyn L., Merker, Jason D.

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Considerations for clinical curation, classification, and reporting of low-penetrance and low effect size variants associated with disease risk von Senol-Cosar, Ozlem, Schmidt, Ryan J., Qian, Emily, Hoskinson, Derick, Mason-Suares, Heather, Funke, Birgit, Lebo, Matthew S.

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Contamination Assessment for Cancer Next-Generation Sequencing von Li, Yvonne Y, Schmidt, Ryan J, Manning, Danielle K, Jia, Yonghui, Dong, Fei

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Genomes from Verteba cave suggest diversity within the Trypillians in Ukraine von Gelabert, Pere, Schmidt, Ryan W., Fernandes, Daniel M., Karsten, Jordan K., Harper, Thomas K., Madden, Gwyn D., Ledogar, Sarah H., Sokhatsky, Mykhailo, Oota, Hiroki, Kennett, Douglas J., Pinhasi, Ron

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VarGrouper: A Bioinformatic Tool for Local Haplotyping of Deletion-Insertion Variants from Next-Generation Sequencing Data after Variant Calling von Schmidt, Ryan J, Macleay, Allison, Le, Long Phi

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Comparative Clinicopathologic and Genomic Analysis of Hepatocellular Neoplasm, Not Otherwise Specified, and Hepatoblastoma von Zhou, Shengmei, Sarabia, Stephen F., Estrine, Dolores, Ostrow, Dejerianne, Schmidt, Ryan J., Warren, Mikako, Raca, Gordana, Shillingford, Nick, Wang, Larry, Pawel, Bruce, Stein, James E., Biegel, Jaclyn A., Lopez-Terrada, Dolores, Mascarenhas, Leo, Ji, Jianling

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Benign Lobular Inner Nuclear Layer Proliferations of the Retina Associated with Congenital Hypertrophy of the Retinal Pigment Epithelium von Sanfilippo, Christian J., Javaheri, Michael, Handler, Sheryl, Berry, Jesse L., Cobrinik, David, Deardorff, Matthew A., Sun, Miao, Schmidt, Ryan J., Barkmeier, Andrew J., Nagiel, Aaron

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X Chromosome Reactivation Dynamics Reveal Stages of Reprogramming to Pluripotency von Pasque, Vincent, Tchieu, Jason, Karnik, Rahul, Uyeda, Molly, Sadhu Dimashkie, Anupama, Case, Dana, Papp, Bernadett, Bonora, Giancarlo, Patel, Sanjeet, Ho, Ritchie, Schmidt, Ryan, McKee, Robin, Sado, Takashi, Tada, Takashi, Meissner, Alexander, Plath, Kathrin

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roles of the reprogramming factors Oct4, Sox2 and Klf4 in resetting the somatic cell epigenome during induced pluripotent stem cell generation von Schmidt, Ryan, Plath, Kathrin

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An Analysis of the Accuracy of Photo-Based Plant Identification Applications on Fifty-Five Tree Species von Schmidt, Ryan, Casario, Brianna, Zipse, Pamela, Grabosky, Jason

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Significance Associated with Phenotype Score Aids in Variant Prioritization for Exome Sequencing Analysis von Lee, Brian, Nasanovsky, Lily, Shen, Lishuang, Maglinte, Dennis T., Pan, Yachen, Gai, Xiaowu, Schmidt, Ryan J., Raca, Gordana, Biegel, Jaclyn A., Roytman, Megan, An, Paul, Saunders, Carol J., Farrow, Emily G., Shams, Soheil, Ji, Jianling

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An Exome Capture-Based RNA-Sequencing Assay for Genome-Wide Identification and Prioritization of Clinically Important Fusions in Pediatric Tumors von Buckley, Jonathan, Schmidt, Ryan J, Ostrow, Dejerianne, Maglinte, Dennis, Bootwalla, Moiz, Ruble, David, Govindarajan, Ananthanarayanan, Ji, Jianling, Kovach, Alexandra E, Orgel, Etan, Raca, Gordana, Navid, Fariba, Mascarenhas, Leo, Pawel, Bruce, Robison, Nathan, Gai, Xiaowu, Biegel, Jaclyn A

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