Genome-wide fine-mapping identifies pleiotropic and functional variants that predict many traits across global cattle populations von Xiang, Ruidong, MacLeod, Iona M., Daetwyler, Hans D., de Jong, Gerben, O’Connor, Erin, Schrooten, Chris, Chamberlain, Amanda J., Goddard, Michael E.

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Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research von Kern, Colin, Wang, Ying, Xu, Xiaoqin, Pan, Zhangyuan, Halstead, Michelle, Chanthavixay, Ganrea, Saelao, Perot, Waters, Susan, Xiang, Ruidong, Chamberlain, Amanda, Korf, Ian, Delany, Mary E., Cheng, Hans H., Medrano, Juan F., Van Eenennaam, Alison L., Tuggle, Chris K., Ernst, Catherine, Flicek, Paul, Quon, Gerald, Ross, Pablo, Zhou, Huaijun

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New loci and neuronal pathways for resilience to heat stress in cattle von Cheruiyot, Evans K., Haile-Mariam, Mekonnen, Cocks, Benjamin G., MacLeod, Iona M., Xiang, Ruidong, Pryce, Jennie E.

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Poor sleep and shift work associate with increased blood pressure and inflammation in UK Biobank participants von Kanki, Monica, Nath, Artika P., Xiang, Ruidong, Yiallourou, Stephanie, Fuller, Peter J., Cole, Timothy J., Cánovas, Rodrigo, Young, Morag J.

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Analysis of 206 whole‐genome resequencing reveals selection signatures associated with breed‐specific traits in Hu sheep von Zhao, Fuping, Xie, Rui, Fang, Lingzhao, Xiang, Ruidong, Yuan, Zehu, Liu, Yang, Wang, Lixian

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Genome-wide comparative analyses of correlated and uncorrelated phenotypes identify major pleiotropic variants in dairy cattle von Xiang, Ruidong, MacLeod, Iona M., Bolormaa, Sunduimijid, Goddard, Michael E.

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Recent advances in polygenic scores: translation, equitability, methods and FAIR tools von Xiang, Ruidong, Kelemen, Martin, Xu, Yu, Harris, Laura W, Parkinson, Helen, Inouye, Michael, Lambert, Samuel A

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Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle von Prowse-Wilkins, Claire P, Lopdell, Thomas J, Xiang, Ruidong, Vander Jagt, Christy J, Littlejohn, Mathew D, Chamberlain, Amanda J, Goddard, Michael E

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Meta-analysis for milk fat and protein percentage using imputed sequence variant genotypes in 94,321 cattle from eight cattle breeds von van den Berg, Irene, Xiang, Ruidong, Jenko, Janez, Pausch, Hubert, Boussaha, Mekki, Schrooten, Chris, Tribout, Thierry, Gjuvsland, Arne B, Boichard, Didier, Nordbø, Øyvind, Sanchez, Marie-Pierre, Goddard, Mike E

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Allele-specific binding variants causing ChIP-seq peak height of histone modification are not enriched in expression QTL annotations von Ghoreishifar, Mohammad, Chamberlain, Amanda J, Xiang, Ruidong, Prowse-Wilkins, Claire P, Lopdell, Thomas J, Littlejohn, Mathew D, Pryce, Jennie E, Goddard, Michael E

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Editorial: Multi-Layered Genome-Wide Association/Prediction in Animals von Xiang, Ruidong, Fang, Lingzhao, Sanchez, Marie-Pierre, Cheng, Hao, Zhang, Zhe

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In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants von Nguyen, Tuan V, Vander Jagt, Christy J, Wang, Jianghui, Daetwyler, Hans D, Xiang, Ruidong, Goddard, Michael E, Nguyen, Loan T, Ross, Elizabeth M, Hayes, Ben J, Chamberlain, Amanda J, MacLeod, Iona M

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Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle von Liu, Shuli, Fang, Lingzhao, Zhou, Yang, Santos, Daniel J A, Xiang, Ruidong, Daetwyler, Hans D, Chamberlain, Amanda J, Cole, John B, Li, Cong-Jun, Yu, Ying, Ma, Li, Zhang, Shengli, Liu, George E

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Putative Causal Variants Are Enriched in Annotated Functional Regions From Six Bovine Tissues von Prowse-Wilkins, Claire P., Wang, Jianghui, Xiang, Ruidong, Garner, Josie B., Goddard, Michael E., Chamberlain, Amanda J.

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Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle von Dorji, Jigme, Vander Jagt, Christy J, Garner, Josie B, Marett, Leah C, Mason, Brett A, Reich, Coralie M, Xiang, Ruidong, Clark, Emily L, Cocks, Benjamin G, Chamberlain, Amanda J, MacLeod, Iona M, Daetwyler, Hans D

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Using expression data to fine map QTL associated with fertility in dairy cattle von van den Berg, Irene, Chamberlain, Amanda J, MacLeod, Iona M, Nguyen, Tuan V, Goddard, Mike E, Xiang, Ruidong, Mason, Brett, Meier, Susanne, Phyn, Claire V C, Burke, Chris R, Pryce, Jennie E

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Correction to: Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle von Dorji, Jigme, Vander Jagt, Christy J, Garner, Josie B, Marett, Leah C, Mason, Brett A, Reich, Coralie M, Xiang, Ruidong, Clark, Emily L, Cocks, Benjamin G, Chamberlain, Amanda J, MacLeod, Iona M, Daetwyler, Hans D

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Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues von Xiang, Ruidong, Hayes, Ben J, Vander Jagt, Christy J, MacLeod, Iona M, Khansefid, Majid, Bowman, Phil J, Yuan, Zehu, Prowse-Wilkins, Claire P, Reich, Coralie M, Mason, Brett A, Garner, Josie B, Marett, Leah C, Chen, Yizhou, Bolormaa, Sunduimijid, Daetwyler, Hans D, Chamberlain, Amanda J, Goddard, Michael E

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Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits von Yuan, Zehu, Sunduimijid, Bolormaa, Xiang, Ruidong, Behrendt, Ralph, Knight, Matthew I, Mason, Brett A, Reich, Coralie M, Prowse-Wilkins, Claire, Vander Jagt, Christy J, Chamberlain, Amanda J, MacLeod, Iona M, Li, Fadi, Yue, Xiangpeng, Daetwyler, Hans D

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Correction: In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants von Nguyen, Tuan V, Vander Jagt, Christy J, Wang, Jianghui, Daetwyler, Hans D, Xiang, Ruidong, Goddard, Michael E, Nguyen, Loan T, Ross, Elizabeth M, Hayes, Ben J, Chamberlain, Amanda J, MacLeod, Iona M

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