Identifying Human Naïve Pluripotent Stem Cells − Evaluating State‐Specific Reporter Lines and Cell‐Surface Markers von Collier, Amanda J., Rugg‐Gunn, Peter J.

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Multi-omics profiling of mouse gastrulation at single-cell resolution von Argelaguet, Ricard, Clark, Stephen J., Mohammed, Hisham, Stapel, L. Carine, Krueger, Christel, Kapourani, Chantriolnt-Andreas, Imaz-Rosshandler, Ivan, Lohoff, Tim, Xiang, Yunlong, Hanna, Courtney W., Smallwood, Sebastien, Ibarra-Soria, Ximena, Buettner, Florian, Sanguinetti, Guido, Xie, Wei, Krueger, Felix, Göttgens, Berthold, Rugg-Gunn, Peter J., Kelsey, Gavin, Dean, Wendy, Nichols, Jennifer, Stegle, Oliver, Marioni, John C., Reik, Wolf

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Comprehensive Cell Surface Protein Profiling Identifies Specific Markers of Human Naive and Primed Pluripotent States von Collier, Amanda J., Panula, Sarita P., Schell, John Paul, Chovanec, Peter, Plaza Reyes, Alvaro, Petropoulos, Sophie, Corcoran, Anne E., Walker, Rachael, Douagi, Iyadh, Lanner, Fredrik, Rugg-Gunn, Peter J.

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Comparative Principles of DNA Methylation Reprogramming during Human and Mouse In Vitro Primordial Germ Cell Specification von von Meyenn, Ferdinand, Berrens, Rebecca V., Andrews, Simon, Santos, Fátima, Collier, Amanda J., Krueger, Felix, Osorno, Rodrigo, Dean, Wendy, Rugg-Gunn, Peter J., Reik, Wolf

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Deletion of the Polycomb-Group Protein EZH2 Leads to Compromised Self-Renewal and Differentiation Defects in Human Embryonic Stem Cells von Collinson, Adam, Collier, Amanda J., Morgan, Natasha P., Sienerth, Arnold R., Chandra, Tamir, Andrews, Simon, Rugg-Gunn, Peter J.

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Distinct histone modifications in stem cell lines and tissue lineages from the early mouse embryo von Rugg-Gunn, Peter J, Cox, Brian J, Ralston, Amy, Rossant, Janet

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Long-Range Enhancer Interactions Are Prevalent in Mouse Embryonic Stem Cells and Are Reorganized upon Pluripotent State Transition von Novo, Clara Lopes, Javierre, Biola-Maria, Cairns, Jonathan, Segonds-Pichon, Anne, Wingett, Steven W., Freire-Pritchett, Paula, Furlan-Magaril, Mayra, Schoenfelder, Stefan, Fraser, Peter, Rugg-Gunn, Peter J.

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Widespread reorganisation of pluripotent factor binding and gene regulatory interactions between human pluripotent states von Chovanec, Peter, Collier, Amanda J., Krueger, Christel, Várnai, Csilla, Semprich, Claudia I., Schoenfelder, Stefan, Corcoran, Anne E., Rugg-Gunn, Peter J.

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Species-specific regulation of XIST by the JPX/FTX orthologs von Rosspopoff, Olga, Cazottes, Emmanuel, Huret, Christophe, Loda, Agnese, Collier, Amanda J, Casanova, Miguel, Rugg-Gunn, Peter J, Heard, Edith, Ouimette, Jean-François, Rougeulle, Claire

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Molecular profiling of aged neural progenitors identifies Dbx2 as a candidate regulator of age‐associated neurogenic decline von Lupo, Giuseppe, Nisi, Paola S., Esteve, Pilar, Paul, Yu‐Lee, Novo, Clara Lopes, Sidders, Ben, Khan, Muhammad A., Biagioni, Stefano, Liu, Hai‐Kun, Bovolenta, Paola, Cacci, Emanuele, Rugg‐Gunn, Peter J.

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Assessing the Safety of Human Pluripotent Stem Cells and Their Derivatives for Clinical Applications von Andrews, Peter W., Ben-David, Uri, Benvenisty, Nissim, Coffey, Peter, Eggan, Kevin, Knowles, Barbara B., Nagy, Andras, Pera, Martin, Reubinoff, Benjamin, Rugg-Gunn, Peter J., Stacey, Glyn N.

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Satellite repeat transcripts modulate heterochromatin condensates and safeguard chromosome stability in mouse embryonic stem cells von Novo, Clara Lopes, Wong, Emily V., Hockings, Colin, Poudel, Chetan, Sheekey, Eleanor, Wiese, Meike, Okkenhaug, Hanneke, Boulton, Simon J., Basu, Srinjan, Walker, Simon, Kaminski Schierle, Gabriele S., Narlikar, Geeta J., Rugg-Gunn, Peter J.

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Global reorganisation of cis -regulatory units upon lineage commitment of human embryonic stem cells von Freire-Pritchett, Paula, Schoenfelder, Stefan, Várnai, Csilla, Wingett, Steven W, Cairns, Jonathan, Collier, Amanda J, García-Vílchez, Raquel, Furlan-Magaril, Mayra, Osborne, Cameron S, Fraser, Peter, Rugg-Gunn, Peter J, Spivakov, Mikhail

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Promoter interactome of human embryonic stem cell-derived cardiomyocytes connects GWAS regions to cardiac gene networks von Choy, Mun-Kit, Javierre, Biola M., Williams, Simon G., Baross, Stephanie L., Liu, Yingjuan, Wingett, Steven W., Akbarov, Artur, Wallace, Chris, Freire-Pritchett, Paula, Rugg-Gunn, Peter J., Spivakov, Mikhail, Fraser, Peter, Keavney, Bernard D.

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Cell-Surface Proteomics Identifies Lineage-Specific Markers of Embryo-Derived Stem Cells von Rugg-Gunn, Peter J., Cox, Brian J., Lanner, Fredrik, Sharma, Parveen, Ignatchenko, Vladimir, McDonald, Angela C.H., Garner, Jodi, Gramolini, Anthony O., Rossant, Janet, Kislinger, Thomas

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Amniogenesis occurs in two independent waves in primates von Rostovskaya, Maria, Andrews, Simon, Reik, Wolf, Rugg-Gunn, Peter J.

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Genome-wide analysis of DNA replication and DNA double-strand breaks using TrAEL-seq von Kara, Neesha, Krueger, Felix, Rugg-Gunn, Peter, Houseley, Jonathan

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TGFβ signalling is required to maintain pluripotency of human naïve pluripotent stem cells von Osnato, Anna, Brown, Stephanie, Krueger, Christel, Andrews, Simon, Collier, Amanda J, Nakanoh, Shota, Quiroga Londoño, Mariana, Wesley, Brandon T, Muraro, Daniele, Brumm, A Sophie, Niakan, Kathy K, Vallier, Ludovic, Ortmann, Daniel, Rugg-Gunn, Peter J

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Epigenetic regulation of early human embryo development von Wilkinson, Amy L, Zorzan, Irene, Rugg-Gunn, Peter J

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The pluripotency factor Nanog regulates pericentromeric heterochromatin organization in mouse embryonic stem cells von Novo, Clara Lopes, Tang, Calvin, Ahmed, Kashif, Djuric, Ugljesa, Fussner, Eden, Mullin, Nicholas P, Morgan, Natasha P, Hayre, Jasvinder, Sienerth, Arnold R, Elderkin, Sarah, Nishinakamura, Ryuichi, Chambers, Ian, Ellis, James, Bazett-Jones, David P, Rugg-Gunn, Peter J

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