Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology von Mellmann, Alexander, Harmsen, Dag, Cummings, Craig A, Zentz, Emily B, Leopold, Shana R, Rico, Alain, Prior, Karola, Szczepanowski, Rafael, Ji, Yongmei, Zhang, Wenlan, McLaughlin, Stephen F, Henkhaus, John K, Leopold, Benjamin, Bielaszewska, Martina, Prager, Rita, Brzoska, Pius M, Moore, Richard L, Guenther, Simone, Rothberg, Jonathan M, Karch, Helge

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Progress in Ion Torrent semiconductor chip based sequencing von Merriman, Barry, R&D Team, Ion Torrent, Rothberg, Jonathan M.

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Ultrasound-on-chip platform for medical imaging, analysis, and collective intelligence von Rothberg, Jonathan M., Ralston, Tyler S., Rothberg, Alex G., Martin, John, Zahorian, Jaime S., Alie, Susan A., Sanchez, Nevada J., Chen, Kailiang, Chen, Chao, Thiele, Karl, Grosjean, David, Yang, Jungwook, Bao, Liewei, Schneider, Rob, Schaetz, Sebastian, Meyer, Christophe, Neben, Abraham, Ryan, Bob, Petrus, J. R., Lutsky, Joe, McMahill, Dan, Corteville, Gregory, Hageman, Matthew R., Miller, Larry, Fife, Keith G.

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Impaired Mitochondrial Dynamics and Mitophagy in Neuronal Models of Tuberous Sclerosis Complex von Ebrahimi-Fakhari, Darius, Saffari, Afshin, Wahlster, Lara, Di Nardo, Alessia, Turner, Daria, Lewis, Tommy L., Conrad, Christopher, Rothberg, Jonathan M., Lipton, Jonathan O., Kölker, Stefan, Hoffmann, Georg F., Han, Min-Joon, Polleux, Franck, Sahin, Mustafa

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Droplet microfluidic technology for single-cell high-throughput screening von Brouzes, Eric, Medkova, Martina, Savenelli, Neal, Marran, Dave, Twardowski, Mariusz, Hutchison, J. Brian, Rothberg, Jonathan M, Link, Darren R, Perrimon, Norbert, Samuels, Michael L

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The development and impact of 454 sequencing von Rothberg, Jonathan M, Leamon, John H

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Assessment of whole genome amplification-induced bias through high-throughput, massively parallel whole genome sequencing von Pinard, Robert, de Winter, Alex, Sarkis, Gary J, Gerstein, Mark B, Tartaro, Karrie R, Plant, Ramona N, Egholm, Michael, Rothberg, Jonathan M, Leamon, John H

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Identification of apilimod as a first-in-class PIKfyve kinase inhibitor for treatment of B-cell non-Hodgkin lymphoma von Gayle, Sophia, Landrette, Sean, Beeharry, Neil, Conrad, Chris, Hernandez, Marylens, Beckett, Paul, Ferguson, Shawn M., Mandelkern, Talya, Zheng, Meiling, Xu, Tian, Rothberg, Jonathan, Lichenstein, Henri

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An integrated semiconductor device enabling non-optical genome sequencing von Rothberg, Jonathan M., Hinz, Wolfgang, Rearick, Todd M., Schultz, Jonathan, Mileski, William, Davey, Mel, Leamon, John H., Johnson, Kim, Milgrew, Mark J., Edwards, Matthew, Hoon, Jeremy, Simons, Jan F., Marran, David, Myers, Jason W., Davidson, John F., Branting, Annika, Nobile, John R., Puc, Bernard P., Light, David, Clark, Travis A., Huber, Martin, Branciforte, Jeffrey T., Stoner, Isaac B., Cawley, Simon E., Lyons, Michael, Fu, Yutao, Homer, Nils, Sedova, Marina, Miao, Xin, Reed, Brian, Sabina, Jeffrey, Feierstein, Erika, Schorn, Michelle, Alanjary, Mohammad, Dimalanta, Eileen, Dressman, Devin, Kasinskas, Rachel, Sokolsky, Tanya, Fidanza, Jacqueline A., Namsaraev, Eugeni, McKernan, Kevin J., Williams, Alan, Roth, G. Thomas, Bustillo, James

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The complete genome of an individual by massively parallel DNA sequencing von Wheeler, David A., Srinivasan, Maithreyan, Egholm, Michael, Shen, Yufeng, Chen, Lei, McGuire, Amy, He, Wen, Chen, Yi-Ju, Makhijani, Vinod, Roth, G. Thomas, Gomes, Xavier, Tartaro, Karrie, Niazi, Faheem, Turcotte, Cynthia L., Irzyk, Gerard P., Lupski, James R., Chinault, Craig, Song, Xing-zhi, Liu, Yue, Yuan, Ye, Nazareth, Lynne, Qin, Xiang, Muzny, Donna M., Margulies, Marcel, Weinstock, George M., Gibbs, Richard A., Rothberg, Jonathan M.

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Low-Abundance Drug-Resistant Viral Variants in Chronically HIV-Infected, Antiretroviral Treatment–Naive Patients Significantly Impact Treatment Outcomes von Simen, Birgitte B., Simons, Jan Fredrik, Hullsiek, Katherine Huppler, Novak, Richard M., MacArthur, Rodger D., Baxter, John D., Huang, Chunli, Lubeski, Christine, Turenchalk, Gregory S., Braverman, Michael S., Desany, Brian, Rothberg, Jonathan M., Egholm, Michael

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Analysis of one million base pairs of Neanderthal DNA von Green, Richard E., Krause, Johannes, Ptak, Susan E., Briggs, Adrian W., Ronan, Michael T., Simons, Jan F., Du, Lei, Egholm, Michael, Rothberg, Jonathan M., Paunovic, Maja, Pääbo, Svante

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A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing von Green, Richard E., Malaspinas, Anna-Sapfo, Krause, Johannes, Briggs, Adrian W., Johnson, Philip L.F., Uhler, Caroline, Meyer, Matthias, Good, Jeffrey M., Maricic, Tomislav, Stenzel, Udo, Prüfer, Kay, Siebauer, Michael, Burbano, Hernán A., Ronan, Michael, Rothberg, Jonathan M., Egholm, Michael, Rudan, Pavao, Brajković, Dejana, Kućan, Željko, Gušić, Ivan, Wikström, Mårten, Laakkonen, Liisa, Kelso, Janet, Slatkin, Montgomery, Pääbo, Svante

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Gaining confidence in high-throughput protein interaction networks von Bader, Joel S, Chaudhuri, Amitabha, Rothberg, Jonathan M, Chant, John

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Massively parallel ("next-generation") DNA sequencing von Gould Rothberg, Bonnie E, Rothberg, Jonathan M

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A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae von Uetz, Peter, Giot, Loic, Cagney, Gerard, Mansfield, Traci A., Judson, Richard S., Knight, James R., Lockshon, Daniel, Narayan, Vaibhav, Srinivasan, Maithreyan, Pochart, Pascale, Qureshi-Emili, Alia, Li, Ying, Godwin, Brian, Conover, Diana, Kalbfleisch, Theodore, Vijayadamodar, Govindan, Yang, Meijia, Johnston, Mark, Fields, Stanley, Rothberg, Jonathan M.

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Impaired Mitochondrial Dynamics And Mitophagy In Neuronal Models Of Tuberous Sclerosis Complex von Ebrahimi-Fakhari, Darius, Saffari, Afshin, Wahlster, Lara, DiNardo, Alessia, Turner, Daria, Lewis, Tommy L., Conrad, Christopher, Rothberg, Jonathan M., Lipton, Jonathan O., Kölker, Stefan, Hoffmann, Georg F., Han, Min-Joon, Polleux, Franck, Sahin, Mustafa

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Sensitive mutation detection in heterogeneous cancer specimens by massively parallel picoliter reactor sequencing von Thomas, Roman K, Nickerson, Elizabeth, Simons, Jan F, Jänne, Pasi A, Tengs, Torstein, Yuza, Yuki, Garraway, Levi A, LaFramboise, Thomas, Lee, Jeffrey C, Shah, Kinjal, O'Neill, Keith, Sasaki, Hidefumi, Lindeman, Neal, Wong, Kwok-Kin, Borras, Ana M, Gutmann, Edward J, Dragnev, Konstantin H, DeBiasi, Ralph, Chen, Tzu-Hsiu, Glatt, Karen A, Greulich, Heidi, Desany, Brian, Lubeski, Christine K, Brockman, William, Alvarez, Pablo, Hutchison, Stephen K, Leamon, J H, Ronan, Michael T, Turenchalk, Gregory S, Egholm, Michael, Sellers, William R, Rothberg, Jonathan M, Meyerson, Matthew

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PDGF-D, a new protease-activated growth factor von LaRochelle, William J., Jeffers, Michael, McDonald, William F., Chillakuru, Rajeev A., Giese, Neill A., Lokker, Nathalie A., Sullivan, Carol, Boldog, Ferenc L., Yang, Meijia, Vernet, Corine, Burgess, Catherine E., Fernandes, Elma, Deegler, Lisa L., Rittman, Beth, Shimkets, Juliette, Shimkets, Richard A., Rothberg, Jonathan M., Lichenstein, Henri S.

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Overview: methods and applications for droplet compartmentalization of biology von Leamon, John H, Link, Darren R, Egholm, Michael, Rothberg, Jonathan M

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