miRTissue ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions von Fiannaca, Antonino, Paglia, Laura La, Rosa, Massimo La, Rizzo, Riccardo, Urso, Alfonso

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ceRNA Network Regulation of TGF-β, WNT, FOXO, Hedgehog Pathways in the Pharynx of Ciona robusta von Vizzini, Aiti, Bonura, Angela, La Paglia, Laura, Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Arizza, Vincenzo

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MiRNATIP: a SOM-based miRNA-target interactions predictor von Fiannaca, Antonino, Rosa, Massimo La, Paglia, Laura La, Rizzo, Riccardo, Urso, Alfonso

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Deep learning models for bacteria taxonomic classification of metagenomic data von Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Lo Bosco, Giosue', Renda, Giovanni, Rizzo, Riccardo, Gaglio, Salvatore, Urso, Alfonso

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GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data von Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Gaglio, Salvatore, Urso, Alfonso

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A Graph Neural Network Approach for the Analysis of siRNA-Target Biological Networks von La Rosa, Massimo, Fiannaca, Antonino, La Paglia, Laura, Urso, Alfonso

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BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources von Messina, Antonio, Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Urso, Alfonso

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Radical versus Nucleophilic Mechanism of Formaldehyde Polymerization Catalyzed by (WO3)3 Clusters on Reduced or Stoichiometric TiO2(110) von Di Valentin, Cristiana, Rosa, Massimo, Pacchioni, Gianfranco

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Probabilistic topic modeling for the analysis and classification of genomic sequences von La Rosa, Massimo, Fiannaca, Antonino, Rizzo, Riccardo, Urso, Alfonso

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MiRNA therapeutics based on logic circuits of biological pathways von Boscaino, Valeria, Fiannaca, Antonino, La Paglia, Laura, La Rosa, Massimo, Rizzo, Riccardo, Urso, Alfonso

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miRTissue: a web application for the analysis of miRNA-target interactions in human tissues von Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Urso, Alfonso

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An expert system hybrid architecture to support experiment management von Fiannaca, Antonino, La Rosa, Massimo, Rizzo, Riccardo, Urso, Alfonso, Gaglio, Salvatore

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Transcriptomic Analyses Reveal 2 and 4 Family Members of Cytochromes P450 (CYP) Involved in LPS Inflammatory Response in Pharynx of Ciona robusta von Vizzini, Aiti, Bonura, Angela, La Paglia, Laura, Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Mauro, Manuela, Vazzana, Mirella, Arizza, Vincenzo

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nRC: non-coding RNA Classifier based on structural features von Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Rizzo, Riccardo, Urso, Alfonso

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A Two-Step Feature Selection Radiomic Approach to Predict Molecular Outcomes in Breast Cancer von Brancato, Valentina, Brancati, Nadia, Esposito, Giusy, La Rosa, Massimo, Cavaliere, Carlo, Allarà, Ciro, Romeo, Valeria, De Pietro, Giuseppe, Salvatore, Marco, Aiello, Marco, Sangiovanni, Mara

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BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics von Urso, Alfonso, Fiannaca, Antonino, La Rosa, Massimo, La Paglia, Laura, Lo Bosco, Giosue', Rizzo, Riccardo

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A knowledge-based decision support system in bioinformatics: an application to protein complex extraction von Fiannaca, Antonino, La Rosa, Massimo, Urso, Alfonso, Rizzo, Riccardo, Gaglio, Salvatore

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2,2’4,4’-Tetrabromodiphenyl Ether (PBDE-47) Modulates the Intracellular miRNA Profile, sEV Biogenesis and Their miRNA Cargo Exacerbating the LPS-Induced Pro-Inflammatory Response i... von Longo, Valeria, Longo, Alessandra, Adamo, Giorgia, Fiannaca, Antonino, Picciotto, Sabrina, La Paglia, Laura, Romancino, Daniele, La Rosa, Massimo, Urso, Alfonso, Cibella, Fabio, Bongiovanni, Antonella, Colombo, Paolo

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Direct RNA Nanopore Sequencing of SARS-CoV-2 Extracted from Critical Material from Swabs von Vacca, Davide, Fiannaca, Antonino, Tramuto, Fabio, Cancila, Valeria, La Paglia, Laura, Mazzucco, Walter, Gulino, Alessandro, La Rosa, Massimo, Maida, Carmelo Massimo, Morello, Gaia, Belmonte, Beatrice, Casuccio, Alessandra, Maugeri, Rosario, Iacopino, Gerardo, Balistreri, Carmela Rita, Vitale, Francesco, Tripodo, Claudio, Urso, Alfonso

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The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes von Romano, Paolo, Céol, Arnaud, Dräger, Andreas, Fiannaca, Antonino, Giugno, Rosalba, La Rosa, Massimo, Milanesi, Luciano, Pfeffer, Ulrich, Rizzo, Riccardo, Shin, Soo-Yong, Xia, Junfeng, Urso, Alfonso

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