Improved reconstruction of in silico gene regulatory networks by integrating knockout and perturbation data von Yip, Kevin Y, Alexander, Roger P, Yan, Koon-Kiu, Gerstein, Mark

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Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors von Alexander, Roger P, Zhulin, Igor B

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Small RNA Sequencing across Diverse Biofluids Identifies Optimal Methods for exRNA Isolation von Srinivasan, Srimeenakshi, Yeri, Ashish, Cheah, Pike See, Chung, Allen, Danielson, Kirsty, De Hoff, Peter, Filant, Justyna, Laurent, Clara D., Laurent, Lucie D., Magee, Rogan, Moeller, Courtney, Murthy, Venkatesh L., Nejad, Parham, Paul, Anu, Rigoutsos, Isidore, Rodosthenous, Rodosthenis, Shah, Ravi V., Simonson, Bridget, To, Cuong, Wong, David, Yan, Irene K., Zhang, Xuan, Balaj, Leonora, Breakefield, Xandra O., Daaboul, George, Gandhi, Roopali, Lapidus, Jodi, Londin, Eric, Patel, Tushar, Raffai, Robert L., Sood, Anil K., Alexander, Roger P., Das, Saumya, Laurent, Louise C.

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Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks von Yan, Koon-Kiu, Fang, Gang, Bhardwaj, Nitin, Alexander, Roger P, Gerstein, Mark

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Annotating non-coding regions of the genome von Gerstein, Mark B, Alexander, Roger P, Fang, Gang, Rozowsky, Joel, Snyder, Michael

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Understanding transcriptional regulation by integrative analysis of transcription factor binding data von Cheng, Chao, Alexander, Roger, Min, Renqiang, Leng, Jing, Yip, Kevin Y, Rozowsky, Joel, Yan, Koon-Kiu, Dong, Xianjun, Djebali, Sarah, Ruan, Yijun, Davis, Carrie A, Carninci, Piero, Lassman, Timo, Gingeras, Thomas R, Guigó, Roderic, Birney, Ewan, Weng, Zhiping, Snyder, Michael, Gerstein, Mark

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Comparative Genomic and Protein Sequence Analyses of a Complex System Controlling Bacterial Chemotaxis von Wuichet, Kristin, Alexander, Roger P., Zhulin, Igor B.

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RodZ, a component of the bacterial core morphogenic apparatus von Alyahya, S. Anisah, Alexander, Roger, Costa, Teresa, Henriques, Adriano O, Emonet, Thierry, Jacobs-Wagner, Christine

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Understanding modularity in molecular networks requires dynamics von Alexander, Roger P, Kim, Philip M, Emonet, Thierry, Gerstein, Mark B

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Testing Web applications by modeling with FSMs von Andrews, Anneliese A, Offutt, Jeff, Alexander, Roger T

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CheV: CheW-like coupling proteins at the core of the chemotaxis signaling network von Alexander, Roger P, Lowenthal, Andrew C, Harshey, Rasika M, Ottemann, Karen M

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Evaluation of an AGC for a Solar Panel as a Receiver in a VLC System Applied to Access Control von Valencia Lozano, Simon, Martinez Ciro, Roger Alexander, Lopez Giraldo, Francisco Eugenio

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Management of COVID-19 at the pandemic’s first wave in Ecuador von Briones-Claudett, Killen H, Murillo Vásconez, Roger Alexander, Rivera Salas, Carolina del Rosario, Briones-Zamora, Killen H, Briones-Márquez, Diana C, Icaza-Freire, Andrea, Grunauer, Michelle

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An Indoor Visible Light Positioning System for Multi-Cell Networks von Martínez-Ciro, Roger Alexander, López-Giraldo, Francisco Eugenio, Luna-Rivera, José Martín, Ramírez-Aguilera, Atziry Magaly

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Identification of genes critical for resistance to infection by West Nile virus using RNA-Seq analysis von Qian, Feng, Chung, Lisa, Zheng, Wei, Bruno, Vincent, Alexander, Roger P, Wang, Zhong, Wang, Xiaomei, Kurscheid, Sebastian, Zhao, Hongyu, Fikrig, Erol, Gerstein, Mark, Snyder, Michael, Montgomery, Ruth R

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Open Problems in Extracellular RNA Data Analysis: Insights From an ERCC Online Workshop von Alexander, Roger P, Kitchen, Robert R, Tosar, Juan Pablo, Roth, Matthew, Mestdagh, Pieter, Max, Klaas E A, Rozowsky, Joel, Kaczor-Urbanowicz, Karolina Elżbieta, Chang, Justin, Balaj, Leonora, Losic, Bojan, Van Nostrand, Eric L, LaPlante, Emily, Mateescu, Bogdan, White, Brian S, Yu, Rongshan, Milosavljevic, Aleksander, Stolovitzky, Gustavo, Spengler, Ryan M

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The EV antibody database: An interactive database of curated antibodies for extracellular vesicle and nanoparticle research von Morey, Amber, Ng, Martin, Spanos, Michail, Zhang, Piyan, Xu, Tuoye, Cheung, Willi, Chatterjee, Emeli, Gokulnath, Priyanka, Carnel-Amar, Natacha, Soares Chiaretti, Ana Luisa, Nelson, Collin, George, Jubin, Luo, Michelle, Chakraborty, Abhik, Perucci, Luiza, Jones, Jennifer C, Hoff, Peter De, Franklin, Jeffrey L, Raffai, Robert L, Das, Saumya, Routenberg, David A, Nolan, John P, Charest, Al, Laurent, Louise C, Alexander, Roger P

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Characterization of Light-To-Frequency Converter for Visible Light Communication Systems von Martínez Ciro, Roger, López Giraldo, Francisco, Betancur Perez, Andrés, Luna Rivera, Martín

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Design and Implementation of a Multi-Colour Visible Light Communication System Based on a Light-to-Frequency Receiver von Martínez-Ciro, Roger Alexander, López-Giraldo, Francisco Eugenio, Betancur-Perez, Andrés Felipe, Luna-Rivera, Jose Martín

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exRNA-eCLIP intersection analysis reveals a map of extracellular RNA binding proteins and associated RNAs across major human biofluids and carriers von LaPlante, Emily L., Stürchler, Alessandra, Fullem, Robert, Chen, David, Starner, Anne C., Esquivel, Emmanuel, Alsop, Eric, Jackson, Andrew R., Ghiran, Ionita, Pereira, Getulio, Rozowsky, Joel, Chang, Justin, Gerstein, Mark B., Alexander, Roger P., Roth, Matthew E., Franklin, Jeffrey L., Coffey, Robert J., Raffai, Robert L., Mansuy, Isabelle M., Stavrakis, Stavros, deMello, Andrew J., Laurent, Louise C., Wang, Yi-Ting, Tsai, Chia-Feng, Liu, Tao, Jones, Jennifer, Van Keuren-Jensen, Kendall, Van Nostrand, Eric, Mateescu, Bogdan, Milosavljevic, Aleksandar

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