Long Noncoding RNAs: Molecular Modalities to Organismal Functions von Rinn, John L, Chang, Howard Y

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Discovery and annotation of long noncoding RNAs von Mattick, John S, Rinn, John L

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“Cat’s Cradling” the 3D Genome by the Act of LncRNA Transcription von Melé, Marta, Rinn, John L.

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Genome Regulation by Long Noncoding RNAs von Rinn, John L, Chang, Howard Y

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Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution von Briggs, James A., Wolvetang, Ernst J., Mattick, John S., Rinn, John L., Barry, Guy

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Linking RNA biology to lncRNAs von Goff, Loyal A, Rinn, John L

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DeCoN: genome-wide analysis of in vivo transcriptional dynamics during pyramidal neuron fate selection in neocortex von Molyneaux, Bradley J, Goff, Loyal A, Brettler, Andrea C, Chen, Hsu-Hsin, Hrvatin, Siniša, Rinn, John L, Arlotta, Paola

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Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution von Cabili, Moran N, Dunagin, Margaret C, McClanahan, Patrick D, Biaesch, Andrew, Padovan-Merhar, Olivia, Regev, Aviv, Rinn, John L, Raj, Arjun

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The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells von Trapnell, Cole, Cacchiarelli, Davide, Grimsby, Jonna, Pokharel, Prapti, Li, Shuqiang, Morse, Michael, Lennon, Niall J, Livak, Kenneth J, Mikkelsen, Tarjei S, Rinn, John L

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The MicroRNA miR-181 Is a Critical Cellular Metabolic Rheostat Essential for NKT Cell Ontogenesis and Lymphocyte Development and Homeostasis von Henao-Mejia, Jorge, Williams, Adam, Goff, Loyal A., Staron, Matthew, Licona-Limón, Paula, Kaech, Susan M., Nakayama, Maki, Rinn, John L., Flavell, Richard A.

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Interchromosomal interactions: A genomic love story of kissing chromosomes von Maass, Philipp G, Barutcu, A Rasim, Rinn, John L

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Non-coding RNAs as regulators of embryogenesis von Pauli, Andrea, Schier, Alexander F, Rinn, John L

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Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs von Melé, Marta, Mattioli, Kaia, Mallard, William, Shechner, David M, Gerhardinger, Chiara, Rinn, John L

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses von Cabili, Moran N, Trapnell, Cole, Goff, Loyal, Koziol, Magdalena, Tazon-Vega, Barbara, Regev, Aviv, Rinn, John L

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Integrative analyses reveal a long noncoding RNA-mediated sponge regulatory network in prostate cancer von Du, Zhou, Sun, Tong, Hacisuleyman, Ezgi, Fei, Teng, Wang, Xiaodong, Brown, Myles, Rinn, John L., Lee, Mary Gwo-Shu, Chen, Yiwen, Kantoff, Philip W., Liu, X. Shirley

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RNA is essential for PRC2 chromatin occupancy and function in human pluripotent stem cells von Long, Yicheng, Hwang, Taeyoung, Gooding, Anne R., Goodrich, Karen J., Rinn, John L., Cech, Thomas R.

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A comparison of genetically matched cell lines reveals the equivalence of human iPSCs and ESCs von Choi, Jiho, Lee, Soohyun, Mallard, William, Clement, Kendell, Tagliazucchi, Guidantonio Malagoli, Lim, Hotae, Choi, In Young, Ferrari, Francesco, Tsankov, Alexander M, Pop, Ramona, Lee, Gabsang, Rinn, John L, Meissner, Alexander, Park, Peter J, Hochedlinger, Konrad

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Genome-wide RNA-Seq of Human Motor Neurons Implicates Selective ER Stress Activation in Spinal Muscular Atrophy von Ng, Shi-Yan, Soh, Boon Seng, Rodriguez-Muela, Natalia, Hendrickson, David G., Price, Feodor, Rinn, John L., Rubin, Lee L.

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Ribosome profiling reveals resemblance between long non-coding RNAs and 5' leaders of coding RNAs von Chew, Guo-Liang, Pauli, Andrea, Rinn, John L, Regev, Aviv, Schier, Alexander F, Valen, Eivind

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Diverse epigenetic mechanisms maintain parental imprints within the embryonic and extraembryonic lineages von Andergassen, Daniel, Smith, Zachary D., Kretzmer, Helene, Rinn, John L., Meissner, Alexander

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