Deep learning enables accurate clustering with batch effect removal in single-cell RNA-seq analysis von Li, Xiangjie, Wang, Kui, Lyu, Yafei, Pan, Huize, Zhang, Jingxiao, Stambolian, Dwight, Susztak, Katalin, Reilly, Muredach P., Hu, Gang, Li, Mingyao

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Ultraviolet photofragmentation of biomolecular ions von Reilly, James P

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The ABO histo-blood group, endothelial activation, and acute respiratory distress syndrome risk in critical illness von Reilly, John P., Meyer, Nuala J., Shashaty, Michael G. S., Anderson, Brian J., Ittner, Caroline, Dunn, Thomas G., Lim, Brian, Forker, Caitlin, Bonk, Michael P., Kotloff, Ethan, Feng, Rui, Cantu, Edward, Mangalmurti, Nilam S., Calfee, Carolyn S., Matthay, Michael A., Mikacenic, Carmen, Walley, Keith R., Russell, James, Christiani, David C., Wurfel, Mark M., Lanken, Paul N., Reilly, Muredach P., Christie, Jason D.

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Single-Cell Genomics Reveals a Novel Cell State During Smooth Muscle Cell Phenotypic Switching and Potential Therapeutic Targets for Atherosclerosis in Mouse and Human von Pan, Huize, Xue, Chenyi, Auerbach, Benjamin J., Fan, Jiaxin, Bashore, Alexander C., Cui, Jian, Yang, Dina Y., Trignano, Sarah B., Liu, Wen, Shi, Jianting, Ihuegbu, Chinyere O., Bush, Erin C., Worley, Jeremy, Vlahos, Lukas, Laise, Pasquale, Solomon, Robert A., Connolly, Edward S., Califano, Andrea, Sims, Peter A., Zhang, Hanrui, Li, Mingyao, Reilly, Muredach P.

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Cholesterol Efflux Pathways Suppress Inflammasome Activation, NETosis, and Atherogenesis von Westerterp, Marit, Fotakis, Panagiotis, Ouimet, Mireille, Bochem, Andrea E, Zhang, Hanrui, Molusky, Matthew M, Wang, Wei, Abramowicz, Sandra, la Bastide-van Gemert, Sacha, Wang, Nan, Welch, Carrie L, Reilly, Muredach P, Stroes, Erik S, Moore, Kathryn J, Tall, Alan R

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ETD-Cleavable Linker for Confident Cross-linked Peptide Identifications von Zhao, Bingqing, Reilly, Colin P., Reilly, James P.

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ASEP: Gene-based detection of allele-specific expression across individuals in a population by RNA sequencing von Fan, Jiaxin, Hu, Jian, Xue, Chenyi, Zhang, Hanrui, Susztak, Katalin, Reilly, Muredach P., Xiao, Rui, Li, Mingyao

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Use of Multiple Ion Fragmentation Methods to Identify Protein Cross-Links and Facilitate Comparison of Data Interpretation Algorithms von Zhao, Bingqing, Reilly, Colin P, Davis, Caroline, Matouschek, Andreas, Reilly, James P

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MEMS and ECM Sensor Technologies for Cardiorespiratory Sound Monitoring—A Comprehensive Review von Torabi, Yasaman, Shirani, Shahram, Reilly, James P., Gauvreau, Gail M.

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Discovery of Isomerization Intermediates in CdS Magic-Size Clusters von Lynch, Reilly P., Ugras, Thomas J., Robinson, Richard D.

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The AIM2 inflammasome exacerbates atherosclerosis in clonal haematopoiesis von Fidler, Trevor P., Xue, Chenyi, Yalcinkaya, Mustafa, Hardaway, Brian, Abramowicz, Sandra, Xiao, Tong, Liu, Wenli, Thomas, David G., Hajebrahimi, Mohammad Ali, Pircher, Joachim, Silvestre-Roig, Carlos, Kotini, Andriana G., Luchsinger, Larry L., Wei, Ying, Westerterp, Marit, Snoeck, Hans-Willem, Papapetrou, Eirini P., Schulz, Christian, Massberg, Steffen, Soehnlein, Oliver, Ebert, Benjamin, Levine, Ross L., Reilly, Muredach P., Libby, Peter, Wang, Nan, Tall, Alan R.

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ABO Blood Type A Is Associated With Increased Risk of ARDS in Whites Following Both Major Trauma and Severe Sepsis von Reilly, John P., MD, Meyer, Nuala J., MD, FCCP, Shashaty, Michael G.S., MD, Feng, Rui, PhD, Lanken, Paul N., MD, FCCP, Gallop, Robert, PhD, Kaplan, Sandra, BSN, Herlim, Maximilian, Oz, Nathaniel L., BS, Hiciano, Isabel, BA, Campbell, Ana, MD, Holena, Daniel N., MD, Reilly, Muredach P., MBBCh, Christie, Jason D., MD

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Circadian control of innate immunity in macrophages by miR-155 targeting Bmal1 von Curtis, Anne M, Fagundes, Caio T, Yang, Guangrui, Palsson-McDermott, Eva M, Wochal, Paulina, McGettrick, Anne F, Foley, Niamh H, Early, James O, Chen, Lihong, Zhang, Hanrui, Xue, Chenyi, Geiger, Sarah S, Hokamp, Karsten, Reilly, Muredach P, Coogan, Andrew N, Vigorito, Elena, FitzGerald, Garret A, O'Neill, Luke A J

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Resistin is an inflammatory marker of atherosclerosis in humans von REILLY, Muredach P, LEHRKE, Michael, WOLFE, Megan L, ROHATGI, Anand, LAZAR, Mitchell A, RADER, Daniel J

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A guide to genome-wide association analysis and post-analytic interrogation von Reed, Eric, Nunez, Sara, Kulp, David, Qian, Jing, Reilly, Muredach P., Foulkes, Andrea S.

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Interleukin-6 Is a Risk Factor for Atrial Fibrillation in Chronic Kidney Disease: Findings from the CRIC Study von Amdur, Richard L, Mukherjee, Monica, Go, Alan, Barrows, Ian R, Ramezani, Ali, Shoji, Jun, Reilly, Muredach P, Gnanaraj, Joseph, Deo, Raj, Roas, Sylvia, Keane, Martin, Master, Steve, Teal, Valerie, Soliman, Elsayed Z, Yang, Peter, Feldman, Harold, Kusek, John W, Tracy, Cynthia M, Raj, Dominic S

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Relationship of Estimated GFR and Coronary Artery Calcification in the CRIC (Chronic Renal Insufficiency Cohort) Study von Budoff, Matthew J., MD, Rader, Daniel J., MD, Reilly, Muredach P., MD, Mohler, Emile R., MD, Lash, Jim, MD, Yang, Wei, PhD, Rosen, Leigh, MUEP, Glenn, Melanie, MPH, Teal, Valerie, MS, Feldman, Harold I., MD

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The metabolic syndrome: More than the sum of its parts? von REILLY, Muredach P, RADER, Daniel J

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Inflammation and Circulating Natriuretic Peptide Levels von Fish-Trotter, Hannah, Ferguson, Jane F., Patel, Nirav, Arora, Pankaj, Allen, Norrina B., Bachmann, Katherine N., Daniels, Lori B., Reilly, Muredach P., Lima, Joao A.C., Wang, Thomas J., Gupta, Deepak K.

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ABO Blood Group as a Model for Platelet Glycan Modification in Arterial Thrombosis von Zhong, Ming, Zhang, Hanrui, Reilly, John P, Chrisitie, Jason D, Ishihara, Mayumi, Kumagai, Tadahiro, Azadi, Parastoo, Reilly, Muredach P

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