Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements von Mukherjee, Supratim, Stamatis, Dimitri, Bertsch, Jon, Ovchinnikova, Galina, Verezemska, Olena, Isbandi, Michelle, Thomas, Alex D, Ali, Rida, Sharma, Kaushal, Kyrpides, Nikos C, Reddy, T B K

Volltext

IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes von Paez-Espino, David, Roux, Simon, Chen, I-Min A, Palaniappan, Krishna, Ratner, Anna, Chu, Ken, Huntemann, Marcel, Reddy, T B K, Pons, Joan Carles, Llabrés, Mercè, Eloe-Fadrosh, Emiley A, Ivanova, Natalia N, Kyrpides, Nikos C

Volltext

IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses von Roux, Simon, Páez-Espino, David, Chen, I-Min A, Palaniappan, Krishna, Ratner, Anna, Chu, Ken, Reddy, T B K, Nayfach, Stephen, Schulz, Frederik, Call, Lee, Neches, Russell Y, Woyke, Tanja, Ivanova, Natalia N, Eloe-Fadrosh, Emiley A, Kyrpides, Nikos C

Volltext

Genomes OnLine Database (GOLD) v.8: overview and updates von Mukherjee, Supratim, Stamatis, Dimitri, Bertsch, Jon, Ovchinnikova, Galina, Sundaramurthi, Jagadish Chandrabose, Lee, Janey, Kandimalla, Mahathi, Chen, I-Min A, Kyrpides, Nikos C, Reddy, T B K

Volltext

Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-... von Klonowska, Agnieszka, Moulin, Lionel, Ardley, Julie Kaye, Braun, Florence, Gollagher, Margaret Mary, Zandberg, Jaco Daniel, Marinova, Dora Vasileva, Huntemann, Marcel, Reddy, T. B. K., Varghese, Neha Jacob, Woyke, Tanja, Ivanova, Natalia, Seshadri, Rekha, Kyrpides, Nikos, Reeve, Wayne Gerald

Volltext

DOE JGI Metagenome Workflow von Clum, Alicia, Huntemann, Marcel, Bushnell, Brian, Foster, Brian, Foster, Bryce, Roux, Simon, Hajek, Patrick P., Varghese, Neha, Mukherjee, Supratim, Reddy, T. B. K., Daum, Chris, Yoshinaga, Yuko, O'Malley, Ronan, Seshadri, Rekha, Kyrpides, Nikos C., Eloe-Fadrosh, Emiley A., Chen, I-Min A., Copeland, Alex, Ivanova, Natalia N.

Volltext

Identifying genomic data use with the Data Citation Explorer von Byers, Neil, Parker, Charles, Beecroft, Chris, Reddy, T. B. K., Salamon, Hugh, Garrity, George, Fagnan, Kjiersten

Volltext

IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses von Paez-Espino, David, Chen, I-Min A, Palaniappan, Krishna, Ratner, Anna, Chu, Ken, Szeto, Ernest, Pillay, Manoj, Huang, Jinghua, Markowitz, Victor M, Nielsen, Torben, Huntemann, Marcel, K Reddy, T B, Pavlopoulos, Georgios A, Sullivan, Matthew B, Campbell, Barbara J, Chen, Feng, McMahon, Katherine, Hallam, Steve J, Denef, Vincent, Cavicchioli, Ricardo, Caffrey, Sean M, Streit, Wolfgang R, Webster, John, Handley, Kim M, Salekdeh, Ghasem H, Tsesmetzis, Nicolas, Setubal, Joao C, Pope, Phillip B, Liu, Wen-Tso, Rivers, Adam R, Ivanova, Natalia N, Kyrpides, Nikos C

Volltext

A synthesis of bacterial and archaeal phenotypic trait data von Madin, Joshua S., Nielsen, Daniel A., Brbic, Maria, Corkrey, Ross, Danko, David, Edwards, Kyle, Engqvist, Martin K. M., Fierer, Noah, Geoghegan, Jemma L., Gillings, Michael, Kyrpides, Nikos C., Litchman, Elena, Mason, Christopher E., Moore, Lisa, Nielsen, Søren L., Paulsen, Ian T., Price, Nathan D., Reddy, T. B. K., Richards, Matthew A., Rocha, Eduardo P. C., Schmidt, Thomas M., Shaaban, Heba, Shukla, Maulik, Supek, Fran, Tetu, Sasha G., Vieira-Silva, Sara, Wattam, Alice R., Westfall, David A., Westoby, Mark

Volltext

The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole von Martin, Kara, Schmidt, Katrin, Toseland, Andrew, Boulton, Chris A., Barry, Kerrie, Beszteri, Bánk, Brussaard, Corina P. D., Clum, Alicia, Daum, Chris G., Eloe-Fadrosh, Emiley, Fong, Allison, Foster, Brian, Foster, Bryce, Ginzburg, Michael, Huntemann, Marcel, Ivanova, Natalia N., Kyrpides, Nikos C., Lindquist, Erika, Mukherjee, Supratim, Palaniappan, Krishnaveni, Reddy, T. B. K., Rizkallah, Mariam R., Roux, Simon, Timmermans, Klaas, Tringe, Susannah G., van de Poll, Willem H., Varghese, Neha, Valentin, Klaus U., Lenton, Timothy M., Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent, Mock, Thomas

Volltext

Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato von Beukes, Chrizelle W, Palmer, Marike, Manyaka, Puseletso, Chan, Wai Y, Avontuur, Juanita R, van Zyl, Elritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T B K, Daum, Chris, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Blom, Jochen, Whitman, William B, Venter, Stephanus N, Steenkamp, Emma T

Volltext

Phylogenomics and genetic analysis of solvent-producing Clostridium species von Jensen, Rasmus O., Schulz, Frederik, Roux, Simon, Klingeman, Dawn M., Mitchell, Wayne P., Udwary, Daniel, Moraïs, Sarah, Reynoso, Vinicio, Winkler, James, Nagaraju, Shilpa, De Tissera, Sashini, Shapiro, Nicole, Ivanova, Natalia, Reddy, T. B. K., Mizrahi, Itzhak, Utturkar, Sagar M., Bayer, Edward A., Woyke, Tanja, Mouncey, Nigel J., Jewett, Michael C., Simpson, Séan D., Köpke, Michael, Jones, David T., Brown, Steven D.

Volltext

Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days von Nunn, Brook L., Timmins-Schiffman, Emma, Mudge, Miranda C., Plubell, Deanna L., Chebli, Gabriella, Kubanek, Julia, Riffle, Michael, Noble, William S., Harvey, Elizabeth, Nunn, Tasman A., Huntemann, Marcel, Clum, Alicia, Foster, Brian, Foster, Bryce, Roux, Simon, Palaniappan, Krishnaveni, Mukherjee, Supratim, Reddy, T. B. K., Daum, Chris, Copeland, Alex, Chen, I-Min A., Ivanova, Natalia N., Kyrpides, Nikos C., Glavina del Rio, Tijana, Eloe-Fadrosh, Emiley A.

Volltext

IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites von Hadjithomas, Michalis, Chen, I-Min Amy, Chu, Ken, Ratner, Anna, Palaniappan, Krishna, Szeto, Ernest, Huang, Jinghua, Reddy, T B K, Cimermančič, Peter, Fischbach, Michael A, Ivanova, Natalia N, Markowitz, Victor M, Kyrpides, Nikos C, Pati, Amrita

Volltext

Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities von Vangay, Pajau, Burgin, Josephine, Johnston, Anjanette, Beck, Kristen L., Berrios, Daniel C., Blumberg, Kai, Canon, Shane, Chain, Patrick, Chandonia, John-Marc, Christianson, Danielle, Costes, Sylvain V., Damerow, Joan, Duncan, William D., Dundore-Arias, Jose Pablo, Fagnan, Kjiersten, Galazka, Jonathan M., Gibbons, Sean M., Hays, David, Hervey, Judson, Hu, Bin, Hurwitz, Bonnie L., Jaiswal, Pankaj, Joachimiak, Marcin P., Kinkel, Linda, Ladau, Joshua, Martin, Stanton L., McCue, Lee Ann, Miller, Kayd, Mouncey, Nigel, Mungall, Chris, Pafilis, Evangelos, Reddy, T. B. K., Richardson, Lorna, Roux, Simon, Schriml, Lynn M., Shaffer, Justin P., Sundaramurthi, Jagadish Chandrabose, Thompson, Luke R., Timme, Ruth E., Zheng, Jie, Wood-Charlson, Elisha M., Eloe-Fadrosh, Emiley A.

Volltext

Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium von Chaput, Gina, Ford, Jacob, DeDiego, Lani, Narayanan, Achala, Tam, Wing Yin, Whalen, Meghan, Huntemann, Marcel, Clum, Alicia, Spunde, Alex, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Chen, I-Min, Stamatis, Dimitrios, Reddy, T B K, O'Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C, Woyke, Tanja, Glavina Del Rio, Tijana, DeAngelis, Kristen M

Volltext

Cross-Reactive Immunity to Mycobacterium tuberculosis DosR Regulon-Encoded Antigens in Individuals Infected with Environmental, Nontuberculous Mycobacteria von Lin, May Young, Reddy, T.B.K, Arend, Sandra M, Friggen, Annemieke H, Franken, Kees L.M.C, van Meijgaarden, Krista E, Verduyn, Marleen J.C, Schoolnik, Gary K, Klein, Michel R, Ottenhoff, Tom H.M

Volltext

TB database: an integrated platform for tuberculosis research von Reddy, T. B. K., Riley, Robert, Wymore, Farrell, Montgomery, Phillip, DeCaprio, Dave, Engels, Reinhard, Gellesch, Marcel, Hubble, Jeremy, Jen, Dennis, Jin, Heng, Koehrsen, Michael, Larson, Lisa, Mao, Maria, Nitzberg, Michael, Sisk, Peter, Stolte, Christian, Weiner, Brian, White, Jared, Zachariah, Zachariah K., Sherlock, Gavin, Galagan, James E., Ball, Catherine A., Schoolnik, Gary K.

Volltext

Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018 von Klonowska, Agnieszka, Ardley, Julie, Moulin, Lionel, Zandberg, Jaco, Patrel, Delphine, Gollagher, Margaret, Marinova, Dora, Reddy, T B K, Varghese, Neha, Huntemann, Marcel, Woyke, Tanja, Seshadri, Rekha, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne

Volltext

Molecular Dialogues between Early Divergent Fungi and Bacteria in an Antagonism versus a Mutualism von Lastovetsky, Olga A., Krasnovsky, Lev D., Qin, Xiaotian, Gaspar, Maria L., Gryganskyi, Andrii P., Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Pawlowska, Teresa E.

Volltext