Pragmatic reproducible research: improving the research process from raw data to results, bit by bit von Rasmussen, Luke V, Whitley, Eric W, Welty, Leah J

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PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability von Kirby, Jacqueline C, Speltz, Peter, Rasmussen, Luke V, Basford, Melissa, Gottesman, Omri, Peissig, Peggy L, Pacheco, Jennifer A, Tromp, Gerard, Pathak, Jyotishman, Carrell, David S, Ellis, Stephen B, Lingren, Todd, Thompson, Will K, Savova, Guergana, Haines, Jonathan, Roden, Dan M, Harris, Paul A, Denny, Joshua C

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Participant choices for return of genomic results in the eMERGE Network von Hoell, Christin, Wynn, Julia, Rasmussen, Luke V., Marsolo, Keith, Aufox, Sharon A., Chung, Wendy K., Connolly, John J., Freimuth, Robert R., Kochan, David, Hakonarson, Hakon, Harr, Margaret, Holm, Ingrid A., Kullo, Iftikhar J., Lammers, Philip E., Leppig, Kathleen A., Leslie, Nancy D., Myers, Melanie F., Sharp, Richard R., Smith, Maureen E., Prows, Cynthia A.

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Prediction of left ventricular ejection fraction changes in heart failure patients using machine learning and electronic health records: a multi-site study von Adekkanattu, Prakash, Rasmussen, Luke V., Pacheco, Jennifer A., Kabariti, Joseph, Stone, Daniel J., Yu, Yue, Jiang, Guoqian, Luo, Yuan, Brandt, Pascal S., Xu, Zhenxing, Vekaria, Veer, Xu, Jie, Wang, Fei, Benda, Natalie C., Peng, Yifan, Goyal, Parag, Ahmad, Faraz S., Pathak, Jyotishman

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Comparing the effects of four common drug classes on the progression of mild cognitive impairment to dementia using electronic health records von Xu, Jie, Wang, Fei, Zang, Chengxi, Zhang, Hao, Niotis, Kellyann, Liberman, Ava L., Stonnington, Cynthia M., Ishii, Makoto, Adekkanattu, Prakash, Luo, Yuan, Mao, Chengsheng, Rasmussen, Luke V., Xu, Zhenxing, Brandt, Pascal, Pacheco, Jennifer A., Peng, Yifan, Jiang, Guoqian, Isaacson, Richard, Pathak, Jyotishman

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Provider perspectives on the integration of patient-reported outcomes in an electronic health record von Zhang, Renwen, Burgess, Eleanor R, Reddy, Madhu C, Rothrock, Nan E, Bhatt, Surabhi, Rasmussen, Luke V, Butt, Zeeshan, Starren, Justin B

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Genomic Information for Clinicians in the Electronic Health Record: Lessons Learned From the Clinical Genome Resource Project and the Electronic Medical Records and Genomics Networ... von Williams, Marc S, Taylor, Casey Overby, Walton, Nephi A, Goehringer, Scott R, Aronson, Samuel, Freimuth, Robert R, Rasmussen, Luke V, Hall, Eric S, Prows, Cynthia A, Chung, Wendy K, Fedotov, Alexander, Nestor, Jordan, Weng, Chunhua, Rowley, Robb K, Wiesner, Georgia L, Jarvik, Gail P, Del Fiol, Guilherme

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Rapid identification of inflammatory arthritis and associated adverse events following immune checkpoint therapy: a machine learning approach von Tran, Steven D, Lin, Jean, Galvez, Carlos, Rasmussen, Luke V, Pacheco, Jennifer, Perottino, Giovanni M, Rahbari, Kian J, Miller, Charles D, John, Jordan D, Theros, Jonathan, Vogel, Kelly, Dinh, Patrick V, Malik, Sara, Ramzan, Umar, Tegtmeyer, Kyle, Mohindra, Nisha, Johnson, Jodi L, Luo, Yuan, Kho, Abel, Sosman, Jeffrey, Walunas, Theresa L

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Addressing barriers in FAIR data practices for biomedical data von Hughes, Laura D., Tsueng, Ginger, DiGiovanna, Jack, Horvath, Thomas D., Rasmussen, Luke V., Savidge, Tor C., Stoeger, Thomas, Turkarslan, Serdar, Wu, Qinglong, Wu, Chunlei, Su, Andrew I., Pache, Lars

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Implementation of a culturally competent APOL1 genetic testing programme into living donor evaluation: A two-site, non-randomised, pre–post trial design von Smith, Justin D, Agrawal, Akansha, Wicklund, Catherine, Duquette, Debra, Friedewald, John, Rasmussen, Luke V, Gacki-Smith, Jessica, Tandon, S. Darius, Muhammad, Lutfiyya N, Yancy, Clyde W, Dong, Siyuan, Cooper, Matthew, Gilbert, Alexander, Shetty, Aneesha, Gordon, Elisa J

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Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research von Xu, Jie, Rasmussen, Luke V, Shaw, Pamela L, Jiang, Guoqian, Kiefer, Richard C, Mo, Huan, Pacheco, Jennifer A, Speltz, Peter, Zhu, Qian, Denny, Joshua C, Pathak, Jyotishman, Thompson, William K, Montague, Enid

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Developing a standardized but extendable framework to increase the findability of infectious disease datasets von Tsueng, Ginger, Cano, Marco A. Alvarado, Bento, José, Czech, Candice, Kang, Mengjia, Pache, Lars, Rasmussen, Luke V., Savidge, Tor C., Starren, Justin, Wu, Qinglong, Xin, Jiwen, Yeaman, Michael R., Zhou, Xinghua, Su, Andrew I., Wu, Chunlei, Brown, Liliana, Shabman, Reed S., Hughes, Laura D.

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Under-specification as the source of ambiguity and vagueness in narrative phenotype algorithm definitions von Yu, Jingzhi, Pacheco, Jennifer A, Ghosh, Anika S, Luo, Yuan, Weng, Chunhua, Shang, Ning, Benoit, Barbara, Carrell, David S, Carroll, Robert J, Dikilitas, Ozan, Freimuth, Robert R, Gainer, Vivian S, Hakonarson, Hakon, Hripcsak, George, Kullo, Iftikhar J, Mentch, Frank, Murphy, Shawn N, Peissig, Peggy L, Ramirez, Andrea H, Walton, Nephi, Wei, Wei-Qi, Rasmussen, Luke V

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The epidemiology of errors in data capture, management, and analysis: A scoping review of retracted articles and retraction notices in clinical and translational research von Baldridge, Abigail S., Bellinger, Grace C., Fleming, Oriana M., Rasmussen, Luke V., Whitley, Eric W., Welty, Leah J.

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Quality Control Procedures for Genome‐Wide Association Studies von Turner, Stephen, Armstrong, Loren L., Bradford, Yuki, Carlson, Christopher S., Crawford, Dana C., Crenshaw, Andrew T., Andrade, Mariza, Doheny, Kimberly F., Haines, Jonathan L., Hayes, Geoffrey, Jarvik, Gail, Jiang, Lan, Kullo, Iftikhar J., Li, Rongling, Ling, Hua, Manolio, Teri A., Matsumoto, Martha, McCarty, Catherine A., McDavid, Andrew N., Mirel, Daniel B., Paschall, Justin E., Pugh, Elizabeth W., Rasmussen, Luke V., Wilke, Russell A., Zuvich, Rebecca L., Ritchie, Marylyn D.

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Using Machine Learning to Predict Antidepressant Treatment Outcome From Electronic Health Records von Xu, Zhenxing, Vekaria, Veer, Wang, Fei, Cukor, Judith, Su, Chang, Adekkanattu, Prakash, Brandt, Pascal, Jiang, Guoqian, Kiefer, Richard C., Luo, Yuan, Rasmussen, Luke V., Xu, Jie, Xiao, Yunyu, Alexopoulos, George, Pathak, Jyotishman

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331 Reusing EHR Phenotyping Algorithms in Practice: Developing the Colorado Diabetes EHR Research Repository (CODER) von Wilson, Melissa P., Mayer, David A., Rasmussen, Luke V., Khanal, Pramod, Nuriyeva, Maryam, McRae, Michael, Raghavan, Sridharan, Wiley, Laura K.

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Validation of electronic medical record-based phenotyping algorithms: results and lessons learned from the eMERGE network von Newton, Katherine M, Peissig, Peggy L, Kho, Abel Ngo, Bielinski, Suzette J, Berg, Richard L, Choudhary, Vidhu, Basford, Melissa, Chute, Christopher G, Kullo, Iftikhar J, Li, Rongling, Pacheco, Jennifer A, Rasmussen, Luke V, Spangler, Leslie, Denny, Joshua C

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Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data von Denny, Joshua C, Bastarache, Lisa, Ritchie, Marylyn D, Carroll, Robert J, Zink, Raquel, Mosley, Jonathan D, Field, Julie R, Pulley, Jill M, Ramirez, Andrea H, Bowton, Erica, Basford, Melissa A, Carrell, David S, Peissig, Peggy L, Kho, Abel N, Pacheco, Jennifer A, Rasmussen, Luke V, Crosslin, David R, Crane, Paul K, Pathak, Jyotishman, Bielinski, Suzette J, Pendergrass, Sarah A, Xu, Hua, Hindorff, Lucia A, Li, Rongling, Manolio, Teri A, Chute, Christopher G, Chisholm, Rex L, Larson, Eric B, Jarvik, Gail P, Brilliant, Murray H, McCarty, Catherine A, Kullo, Iftikhar J, Haines, Jonathan L, Crawford, Dana C, Masys, Daniel R, Roden, Dan M

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Implementation of workflow engine technology to deliver basic clinical decision support functionality von Huser, Vojtech, Rasmussen, Luke V, Oberg, Ryan, Starren, Justin B

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