PanWeb: A web interface for pan-genomic analysis von Pantoja, Yan, Pinheiro, Kenny, Veras, Allan, Araújo, Fabrício, Lopes de Sousa, Ailton, Guimarães, Luis Carlos, Silva, Artur, Ramos, Rommel T J

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Assessing the Genotypic Differences between Strains of Corynebacterium pseudotuberculosis biovar equi through Comparative Genomics von Baraúna, Rafael A, Ramos, Rommel T J, Veras, Adonney A O, Pinheiro, Kenny C, Benevides, Leandro J, Viana, Marcus V C, Guimarães, Luís C, Edman, Judy M, Spier, Sharon J, Azevedo, Vasco, Silva, Artur

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GapBlaster-A Graphical Gap Filler for Prokaryote Genomes von de Sá, Pablo H C G, Miranda, Fábio, Veras, Adonney, de Melo, Diego Magalhães, Soares, Siomar, Pinheiro, Kenny, Guimarães, Luis, Azevedo, Vasco, Silva, Artur, Ramos, Rommel T J

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The Incidence of AIDS-Defining Illnesses at a Current CD4 Count ≥200 Cells/μL in the Post—Combination Antiretroviral Therapy Era von Mocroft, A., Furrer, H. J., Miro, J. M., Reiss, P., Mussini, C., Kirk, O., Abgrall, S., Ayayi, S., Bartmeyer, B., Braun, D., Castagna, A., Monforte, A. d'Arminio, Gazzard, B., Gutierrez, F., Hurtado, I., Jansen, K., Meyer, L., Muñoz, P., Obel, N., Soler-Palacin, P., Papadopoulos, A., Raffi, F., Ramos, J. T., Rockstroh, J. K., Salmon, D., Torti, C., Warszawski, J., de Wit, S., Zangerle, R., Fabre-Colin, C., Kjaer, J., Chene, G., Grarup, J., Lundgren, J. D.

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Rotavirus gastroenteritis hospitalizations in provinces with different vaccination coverage rates in Spain, 2013-2018 von Ruiz-Contreras, J, Alfayate-Miguelez, S, Carazo-Gallego, B, Onís, E, Díaz-Munilla, L, Mendizabal, M, Méndez Hernández, M, Ferrer-Lorente, B, Unsaín-Mancisidor, M, Ramos-Amador, J T, Croche-Santander, B, Centeno Malfaz, F, Rodríguez-Suárez, J, Cotarelo, M, San-Martín, M, Arístegui, J

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PIPS: pathogenicity island prediction software von Soares, Siomar C, Abreu, Vinícius A C, Ramos, Rommel T J, Cerdeira, Louise, Silva, Artur, Baumbach, Jan, Trost, Eva, Tauch, Andreas, Hirata, Jr, Raphael, Mattos-Guaraldi, Ana L, Miyoshi, Anderson, Azevedo, Vasco

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High-throughput sequencing of black pepper root transcriptome von Gordo, Sheila M C, Pinheiro, Daniel G, Moreira, Edith C O, Rodrigues, Simone M, Poltronieri, Marli C, de Lemos, Oriel F, da Silva, Israel Tojal, Ramos, Rommel T J, Silva, Artur, Schneider, Horacio, Silva, Jr, Wilson A, Sampaio, Iracilda, Darnet, Sylvain

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Reference genes for RT-qPCR studies in Corynebacterium pseudotuberculosis identified through analysis of RNA-seq data von Carvalho, Daiane M, de Sá, Pablo H, Castro, Thiago L. P, Carvalho, Rodrigo D, Pinto, Anne, Gil, Danilo J. P, Bagano, Priscilla, Bastos, Bruno, Costa, Lilia F. M, Meyer, Roberto, Silva, Artur, Azevedo, Vasco, Ramos, Rommel T. J, Pacheco, Luis G. C

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GIPSy: Genomic island prediction software von Soares, Siomar C., Geyik, Hakan, Ramos, Rommel T.J., de Sá, Pablo H.C.G., Barbosa, Eudes G.V., Baumbach, Jan, Figueiredo, Henrique C.P., Miyoshi, Anderson, Tauch, Andreas, Silva, Artur, Azevedo, Vasco

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Pan-genomic analysis of Corynebacterium amycolatum gives insights into molecular mechanisms underpinning the transition to a pathogenic phenotype von Jesus, Hendor N. R., Rocha, Danilo J. P. G., Ramos, Rommel T. J., Silva, Artur, Brenig, Bertram, Góes-Neto, Aristóteles, Costa, Mateus M., Soares, Siomar C., Azevedo, Vasco, Aguiar, Eric R. G. R., Martínez-Martínez, Luiz, Ocampo, Alain, Alibi, Sana, Dorta, Alexis, Pacheco, Luis G. C., Navas, Jesus

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Extended Spectrum Beta-Lactamase-Producing Gram-Negative Bacteria Recovered From an Amazonian Lake Near the City of Belém, Brazil von Freitas, Dhara Y, Araújo, Susana, Folador, Adriana R C, Ramos, Rommel T J, Azevedo, Juliana S N, Tacão, Marta, Silva, Artur, Henriques, Isabel, Baraúna, Rafael A

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Co-Expression Networks for Causal Gene Identification Based on RNA-Seq Data of Corynebacterium pseudotuberculosis von Franco, Edian F, Rana, Pratip, Queiroz Cavalcante, Ana Lidia, da Silva, Artur Luiz, Cybelle Pinto Gomide, Anne, Carneiro Folador, Adriana R, Azevedo, Vasco, Ghosh, Preetam, T J Ramos, Rommel

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The pan-genome of the emerging multidrug-resistant pathogen Corynebacterium striatum von Jesus, Hendor N. R., Ramos, Juliana N., Rocha, Danilo J. P. G., Alves, Daniele A., Silva, Carolina S., Cruz, João V. O., Vieira, Verônica V., Souza, Cassius, Santos, Louisy S., Navas, Jesus, Ramos, Rommel T. J., Azevedo, Vasco, Aguiar, Eric R. G. R., Mattos-Guaraldi, Ana L., Pacheco, Luis G. C.

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Increased risk of group B streptococcal sepsis and meningitis in HIV-exposed uninfected infants in a high-income country von Manzanares, Á., Prieto-Tato, L. M., Escosa-García, L., Navarro, M., Guillén, S., Penin, M., Hernanz-Lobo, A., Soto-Sánchez, B., Beceiro-Mosquera, J., Falces-Romero, I., Ramos-Amador, J. T., Orellana-Miguel, M.Á., Epalza, C.

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PhageWeb - Web Interface for Rapid Identification and Characterization of Prophages in Bacterial Genomes von de Sousa, Ailton Lopes, Maués, Dener, Lobato, Amália, Franco, Edian F, Pinheiro, Kenny, Araújo, Fabrício, Pantoja, Yan, da Costa da Silva, Artur Luiz, Morais, Jefferson, Ramos, Rommel T J

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Text mining for identification of biological entities related to antibiotic resistant organisms von Fortunato Costa, Kelle, Almeida Araújo, Fabrício, Morais, Jefferson, Lisboa Frances, Carlos Renato, Ramos, Rommel T J

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Complete Genome Sequences of Corynebacterium pseudotuberculosis Strains 3/99-5 and 42/02-A, Isolated from Sheep in Scotland and Australia, Respectively von PETHICK, Florence E, LAINSON, Alex F, BARBOSA, Maria S, PINTO, Anne C, DOS SANTOS, Anderson R, SOARES, Siomar C, ALMEIDA, Sintia S, GUIMARAES, Luis C, ABURJAILE, Flavia F, ABREU, Vinicius A. C, RIBEIRO, Dayana, FIAUX, Karina K, YAGA, Raja, DINIZ, Carlos A. A, BARBOSA, Eudes G. V, PEREIRA, Ulisses P, HASSAN, Syed S, ALI, Amjad, BAKHTIAR, Syeda M, DORELLA, Fernanda A, CARNEIRO, Adriana R, RAMOS, Rommel T. J, ROCHA, Flavia S, FLOCKHART, Allen, SCHNEIDER, Maria P. C, MIYOSHI, Anderson, AZEVEDO, Vasco, FONTAINE, Michael C, SMITH, David G. E, DONACHIE, Willie, CERDEIRA, Louise T, SILVA, Artur, BOL, Erik, LOPES, Thiago S

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Boosted protease inhibitors as a therapeutic option in the treatment of HIV‐infected children von Ramos, JT

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Long-Term Effects of Highly Active Antiretroviral Therapy in Pretreated, Vertically HIV Type 1-Infected Children: 6 Years of Follow-Up von Resino, Salvador, Resino, Rosa, Micheloud, Dariela, Gurbindo-Gutiérrez, Dolores, Léon, Juan Antonio, Ramos, José Tomás, Ciria, Luis, de José, Isabel, Mellado, José, Muñoz-Fernández, Ángeles

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Gestational diabetes mellitus in a cohort of HIV‐1 infected women von González‐Tomé, MI, Ramos Amador, JT, Guillen, S, Solís, I, Fernández‐Ibieta, M, Muñoz, E, Almeda, J, Rojano, X, Rojo, P, Nieto, O

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