circBase: a database for circular RNAs von Glažar, Petar, Papavasileiou, Panagiotis, Rajewsky, Nikolaus

Volltext

Identification and Characterization of Circular RNAs As a New Class of Putative Biomarkers in Human Blood von Memczak, Sebastian, Papavasileiou, Panagiotis, Peters, Oliver, Rajewsky, Nikolaus

Volltext

The evolution of gene regulation by transcription factors and microRNAs von Rajewsky, Nikolaus, Chen, Kevin

Volltext

The Impact of miRNA Target Sites in Coding Sequences and in 3′UTRs von Fang, Zhuo, Rajewsky, Nikolaus

Volltext

Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics von Plass, Mireya, Solana, Jordi, Wolf, F Alexander, Ayoub, Salah, Misios, Aristotelis, Glažar, Petar, Obermayer, Benedikt, Theis, Fabian J, Kocks, Christine, Rajewsky, Nikolaus

Volltext

Natural selection on human microRNA binding sites inferred from SNP data von Rajewsky, Nikolaus, Chen, Kevin

Volltext

Roles of Long Noncoding RNAs and Circular RNAs in Translation von Chekulaeva, Marina, Rajewsky, Nikolaus

Volltext

PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells von Wolf, F Alexander, Hamey, Fiona K, Plass, Mireya, Solana, Jordi, Dahlin, Joakim S, Göttgens, Berthold, Rajewsky, Nikolaus, Simon, Lukas, Theis, Fabian J

Volltext

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades von Friedländer, Marc R., Mackowiak, Sebastian D., Li, Na, Chen, Wei, Rajewsky, Nikolaus

Volltext

NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport von Moriel, Noa, Senel, Enes, Friedman, Nir, Rajewsky, Nikolaus, Karaiskos, Nikos, Nitzan, Mor

Volltext

Single-Cell Transcriptomics Characterizes Cell Types in the Subventricular Zone and Uncovers Molecular Defects Impairing Adult Neurogenesis von Zywitza, Vera, Misios, Aristotelis, Bunatyan, Lena, Willnow, Thomas E., Rajewsky, Nikolaus

Volltext

Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed von Rybak-Wolf, Agnieszka, Stottmeister, Christin, Glažar, Petar, Jens, Marvin, Pino, Natalia, Giusti, Sebastian, Hanan, Mor, Behm, Mikaela, Bartok, Osnat, Ashwal-Fluss, Reut, Herzog, Margareta, Schreyer, Luisa, Papavasileiou, Panagiotis, Ivanov, Andranik, Öhman, Marie, Refojo, Damian, Kadener, Sebastian, Rajewsky, Nikolaus

Volltext

Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function von Piwecka, Monika, Glažar, Petar, Hernandez-Miranda, Luis R., Memczak, Sebastian, Wolf, Susanne A., Rybak-Wolf, Agnieszka, Filipchyk, Andrei, Klironomos, Filippos, Jara, Cledi Alicia Cerda, Fenske, Pascal, Trimbuch, Thorsten, Zywitza, Vera, Plass, Mireya, Schreyer, Luisa, Ayoub, Salah, Kocks, Christine, Kühn, Ralf, Rosenmund, Christian, Birchmeier, Carmen, Rajewsky, Nikolaus

Volltext

A Highly Conserved Circular RNA Is Required to Keep Neural Cells in a Progenitor State in the Mammalian Brain von Suenkel, Christin, Cavalli, Daniel, Massalini, Simone, Calegari, Federico, Rajewsky, Nikolaus

Volltext

Identification of proteins and miRNAs that specifically bind an mRNA in vivo von Theil, Kathrin, Imami, Koshi, Rajewsky, Nikolaus

Volltext

A map of human circular RNAs in clinically relevant tissues von Maass, Philipp G., Glažar, Petar, Memczak, Sebastian, Dittmar, Gunnar, Hollfinger, Irene, Schreyer, Luisa, Sauer, Aisha V., Toka, Okan, Aiuti, Alessandro, Luft, Friedrich C., Rajewsky, Nikolaus

Volltext

Tracing tumorigenesis in a solid tumor model at single-cell resolution von Praktiknjo, Samantha D., Obermayer, Benedikt, Zhu, Qionghua, Fang, Liang, Liu, Haiyue, Quinn, Hazel, Stoeckius, Marlon, Kocks, Christine, Birchmeier, Walter, Rajewsky, Nikolaus

Volltext

Transcriptome-wide Analysis of Regulatory Interactions of the RNA-Binding Protein HuR von Lebedeva, Svetlana, Jens, Marvin, Theil, Kathrin, Schwanhäusser, Björn, Selbach, Matthias, Landthaler, Markus, Rajewsky, Nikolaus

Volltext

The oncogenic role of circPVT1 in head and neck squamous cell carcinoma is mediated through the mutant p53/YAP/TEAD transcription-competent complex von Verduci, Lorena, Ferraiuolo, Maria, Sacconi, Andrea, Ganci, Federica, Vitale, Jlenia, Colombo, Teresa, Paci, Paola, Strano, Sabrina, Macino, Giuseppe, Rajewsky, Nikolaus, Blandino, Giovanni

Volltext

The Translational Landscape of the Human Heart von van Heesch, Sebastiaan, Witte, Franziska, Schneider-Lunitz, Valentin, Schulz, Jana F., Adami, Eleonora, Faber, Allison B., Kirchner, Marieluise, Maatz, Henrike, Blachut, Susanne, Sandmann, Clara-Louisa, Kanda, Masatoshi, Worth, Catherine L., Schafer, Sebastian, Calviello, Lorenzo, Merriott, Rhys, Patone, Giannino, Hummel, Oliver, Wyler, Emanuel, Obermayer, Benedikt, Mücke, Michael B., Lindberg, Eric L., Trnka, Franziska, Memczak, Sebastian, Schilling, Marcel, Felkin, Leanne E., Barton, Paul J.R., Quaife, Nicholas M., Vanezis, Konstantinos, Diecke, Sebastian, Mukai, Masaya, Mah, Nancy, Oh, Su-Jun, Kurtz, Andreas, Schramm, Christoph, Schwinge, Dorothee, Sebode, Marcial, Harakalova, Magdalena, Asselbergs, Folkert W., Vink, Aryan, de Weger, Roel A., Viswanathan, Sivakumar, Widjaja, Anissa A., Gärtner-Rommel, Anna, Milting, Hendrik, dos Remedios, Cris, Knosalla, Christoph, Mertins, Philipp, Landthaler, Markus, Vingron, Martin, Linke, Wolfgang A., Seidman, Jonathan G., Seidman, Christine E., Rajewsky, Nikolaus, Ohler, Uwe, Cook, Stuart A., Hubner, Norbert

Volltext