Clinical sequencing: is WGS the better WES? von Meienberg, Janine, Bruggmann, Rémy, Oexle, Konrad, Matyas, Gabor

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Single cell transcriptome atlas of the Drosophila larval brain von Brunet Avalos, Clarisse, Maier, G Larisa, Bruggmann, Rémy, Sprecher, Simon G

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Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling von V'kovski, Philip, Gerber, Markus, Kelly, Jenna, Pfaender, Stephanie, Ebert, Nadine, Braga Lagache, Sophie, Simillion, Cedric, Portmann, Jasmine, Stalder, Hanspeter, Gaschen, Véronique, Bruggmann, Rémy, Stoffel, Michael H, Heller, Manfred, Dijkman, Ronald, Thiel, Volker

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Transcriptome-wide identification of NMD-targeted human mRNAs reveals extensive redundancy between SMG6- and SMG7-mediated degradation pathways von Colombo, Martino, Karousis, Evangelos D, Bourquin, Joël, Bruggmann, Rémy, Mühlemann, Oliver

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The ecological and genomic basis of explosive adaptive radiation von McGee, Matthew D., Borstein, Samuel R., Meier, Joana I., Marques, David A., Mwaiko, Salome, Taabu, Anthony, Kishe, Mary A., O’Meara, Brian, Bruggmann, Rémy, Excoffier, Laurent, Seehausen, Ole

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Contribution of epigenetic variation to adaptation in Arabidopsis von Schmid, Marc W., Heichinger, Christian, Coman Schmid, Diana, Guthörl, Daniela, Gagliardini, Valeria, Bruggmann, Rémy, Aluri, Sirisha, Aquino, Catharine, Schmid, Bernhard, Turnbull, Lindsay A., Grossniklaus, Ueli

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OpenGenomeBrowser: a versatile, dataset-independent and scalable web platform for genome data management and comparative genomics von Roder, Thomas, Oberhänsli, Simone, Shani, Noam, Bruggmann, Rémy

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Claudin-3-deficient C57BL/6J mice display intact brain barriers von Castro Dias, Mariana, Coisne, Caroline, Lazarevic, Ivana, Baden, Pascale, Hata, Masaki, Iwamoto, Noriko, Francisco, David Miguel Ferreira, Vanlandewijck, Michael, He, Liqun, Baier, Felix A., Stroka, Deborah, Bruggmann, Rémy, Lyck, Ruth, Enzmann, Gaby, Deutsch, Urban, Betsholtz, Christer, Furuse, Mikio, Tsukita, Shoichiro, Engelhardt, Britta

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Accumulation of Deleterious Mutations During Bacterial Range Expansions von Bosshard, Lars, Dupanloup, Isabelle, Tenaillon, Olivier, Bruggmann, Rémy, Ackermann, Martin, Peischl, Stephan, Excoffier, Laurent

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The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri von Liechti, Nicole, Schürch, Nadia, Bruggmann, Rémy, Wittwer, Matthias

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CD8+ T cells expand stem and progenitor cells in favorable but not adverse risk acute myeloid leukemia von Radpour, Ramin, Riether, Carsten, Simillion, Cedric, Höpner, Sabine, Bruggmann, Rémy, Ochsenbein, Adrian F.

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Avoiding the pitfalls of gene set enrichment analysis with SetRank von Simillion, Cedric, Liechti, Robin, Lischer, Heidi E L, Ioannidis, Vassilios, Bruggmann, Rémy

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The wheat powdery mildew genome shows the unique evolution of an obligate biotroph von Wicker, Thomas, Oberhaensli, Simone, Parlange, Francis, Buchmann, Jan P, Shatalina, Margarita, Roffler, Stefan, Ben-David, Roi, Doležel, Jaroslav, Šimková, Hana, Schulze-Lefert, Paul, Spanu, Pietro D, Bruggmann, Rémy, Amselem, Joelle, Quesneville, Hadi, Ver Loren van Themaat, Emiel, Paape, Timothy, Shimizu, Kentaro K, Keller, Beat

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Nanopore sequencing improves the draft genome of the human pathogenic amoeba Naegleria fowleri von Liechti, Nicole, Schürch, Nadia, Bruggmann, Rémy, Wittwer, Matthias

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Regulators of Long-Term Memory Revealed by Mushroom Body-Specific Gene Expression Profiling in Drosophila melanogaster von Widmer, Yves F, Bilican, Adem, Bruggmann, Rémy, Sprecher, Simon G

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Molecular characterization of cell types in the squid Loligo vulgaris von Duruz, Jules, Sprecher, Marta, Kaldun, Jenifer C, Al-Soudy, Al-Sayed, Lischer, Heidi E L, van Geest, Geert, Nicholson, Pamela, Bruggmann, Rémy, Sprecher, Simon G

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Genetic and Phenotypic Diversity of Morganella morganii Isolated From Cheese von Ryser, Lorenz Timo, Arias-Roth, Emmanuelle, Perreten, Vincent, Irmler, Stefan, Bruggmann, Rémy

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Scoary2: rapid association of phenotypic multi-omics data with microbial pan-genomes von Roder, Thomas, Pimentel, Grégory, Fuchsmann, Pascal, Stern, Mireille Tena, von Ah, Ueli, Vergères, Guy, Peischl, Stephan, Brynildsrud, Ola, Bruggmann, Rémy, Bär, Cornelia

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Independent polled mutations leading to complex gene expression differences in cattle von Wiedemar, Natalie, Tetens, Jens, Jagannathan, Vidhya, Menoud, Annie, Neuenschwander, Samuel, Bruggmann, Rémy, Thaller, Georg, Drögemüller, Cord

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Indication of Cross-Species Transmission of Astrovirus Associated with Encephalitis in Sheep and Cattle von Boujon, Céline L, Koch, Michel C, Wüthrich, Daniel, Werder, Simea, Jakupovic, Dennis, Bruggmann, Rémy, Seuberlich, Torsten

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