Development of strategies for SNP detection in RNA-seq data: application to lymphoblastoid cell lines and evaluation using 1000 Genomes data von Quinn, Emma M, Cormican, Paul, Kenny, Elaine M, Hill, Matthew, Anney, Richard, Gill, Michael, Corvin, Aiden P, Morris, Derek W

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Spontaneous atopic dermatitis is mediated by innate immunity, with the secondary lung inflammation of the atopic march requiring adaptive immunity von Saunders, Sean P., PhD, Moran, Tara, BSc, Floudas, Achilleas, PhD, Wurlod, Felicity, MSc, Kaszlikowska, Agnieszka, BSc, Salimi, Maryam, PhD, Quinn, Emma M., PhD, Oliphant, Christopher J., PhD, Núñez, Gabriel, MD, McManus, Ross, PhD, Hams, Emily, PhD, Irvine, Alan D., MD, McKenzie, Andrew N.J., PhD, Ogg, Graham S., MD, Fallon, Padraic G., PhD

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Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFNγ Regulation von Quinn, Emma M, Coleman, Ciara, Molloy, Ben, Dominguez Castro, Patricia, Cormican, Paul, Trimble, Valerie, Mahmud, Nasir, McManus, Ross

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Common polygenic variation in coeliac disease and confirmation of ZNF335 and NIFA as disease susceptibility loci von Coleman, Ciara, Quinn, Emma M, Ryan, Anthony W, Conroy, Judith, Trimble, Valerie, Mahmud, Nasir, Kennedy, Nicholas, Corvin, Aiden P, Morris, Derek W, Donohoe, Gary, O'Morain, Colm, MacMathuna, Padraic, Byrnes, Valerie, Kiat, Clifford, Trynka, Gosia, Wijmenga, Cisca, Kelleher, Dermot, Ennis, Sean, Anney, Richard J L, McManus, Ross

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Evidence for cis-acting regulation of ANK3 and CACNA1C gene expression von Quinn, Emma M, Hill, Matthew, Anney, Richard, Gill, Michael, Corvin, Aiden P, Morris, Derek W

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Quality Control Procedures for High-Throughput Genetic Association Studies von Coleman, Ciara, Quinn, Emma M., McManus, Ross

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Quality Control and Analysis of NGS RNA Sequencing Data von Quinn, Emma M., McManus, Ross

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Detecting Allelic Expression Imbalance at Candidate Genes Using 5′ Exonuclease Genotyping Technology von Gahan, Jillian M., Byrne, Mikaela M., Hill, Matthew, Quinn, Emma M., Murphy, Ross T., Anney, Richard J. L., Ryan, Anthony W.

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Psychosis Susceptibility Gene ZNF804A and Cognitive Performance in Schizophrenia von Walters, James T. R, Corvin, Aiden, Owen, Michael J, Williams, Hywel, Dragovic, Milan, Quinn, Emma M, Judge, Róisín, Smith, Daniel J, Norton, Nadine, Giegling, Ina, Hartmann, Annette M, Möller, Hans-Jürgen, Muglia, Pierandrea, Moskvina, Valentina, Dwyer, Sarah, O’Donoghue, Therese, Morar, Bharti, Cooper, Matthew, Chandler, David, Jablensky, Assen, Gill, Michael, Kaladjieva, Luba, Morris, Derek W, O’Donovan, Michael C, Rujescu, Dan, Donohoe, Gary

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Common polygenic variation contributes to risk of schizophrenia and bipolar disorder von Purcell, Shaun M, Wray, Naomi R, Stone, Jennifer L, Visscher, Peter M, O'Donovan, Michael C, Sullivan, Patrick F, Sklar, Pamela

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Identification of loci associated with schizophrenia by genome-wide association and follow-up von Georgieva, Lyudmila, Shifman, Sagiv, Quinn, Emma M, Peirce, Timothy, Giegling, Ina, He, Lin, Leung, Hin-Tak, Duan, Jubao, Moskvina, Valentina, Shi, YongYong, Schumacher, Johannes, Schulze, Thomas G, Craddock, Nicholas, Levinson, Douglas F, Kirov, George, Gill, Michael, O'Donovan, Michael C, Rujescu, Dan, Corvin, Aiden, Marchini, Jonathan L, Owen, Michael J, Zammit, Stanley, Williams, Hywel, Möller, Hans-Jürgen, Vasilescu, Catalina, Spencer, Chris C A, Nöthen, Markus M, Howie, Bryan, Rietschel, Marcella, Norton, Nadine, Nikolov, Ivan, Williams, Nigel M, Gejman, Pablo V, Iwata, Nakao, Hartmann, Annette M, Carroll, Liam, Hoffmann, Per, Darvasi, Ariel, Cichon, Sven, Morris, Derek W, Sanders, Alan R, Feng, GuoYin, Propping, Peter, Ikeda, Masashi, Dwyer, Sarah, Holmans, Peter, Hamshere, Marian, Maier, Wolfgang

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Molecular pathways involved in neuronal cell adhesion and membrane scaffolding contribute to schizophrenia and bipolar disorder susceptibility von O'Dushlaine, C, Kenny, E, Heron, E, Donohoe, G, Gill, M, Morris, D, Corvin, A

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Additive Genetic Variation in Schizophrenia Risk Is Shared by Populations of African and European Descent von de Candia, Teresa R., Lee, S. Hong, Yang, Jian, Browning, Brian L., Gejman, Pablo V., Levinson, Douglas F., Mowry, Bryan J., Hewitt, John K., Goddard, Michael E., O’Donovan, Michael C., Purcell, Shaun M., Posthuma, Danielle, Visscher, Peter M., Wray, Naomi R., Keller, Matthew C.

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Network-assisted investigation of combined causal signals from genome-wide association studies in schizophrenia von Jia, Peilin, Wang, Lily, Fanous, Ayman H, Pato, Carlos N, Edwards, Todd L, Zhao, Zhongming

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A bias-reducing pathway enrichment analysis of genome-wide association data confirmed association of the MHC region with schizophrenia von Jia, Peilin, Wang, Lily, Fanous, Ayman H, Chen, Xiangning, Kendler, Kenneth S, Zhao, Zhongming

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Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFN[gamma] Regulation von Quinn, Emma M, Coleman, Ciara, Molloy, Ben, Dominguez Castro, Patricia, Cormican, Paul, Trimble, Valerie, Mahmud, Nasir, McManus, Ross

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Two non-synonymous markers in PTPN21 , identified by genome-wide association study data-mining and replication, are associated with schizophrenia von Chen, Jingchun, Lee, Grace, Fanous, Ayman H, Zhao, Zhongming, Jia, Peilin, O'Neill, Anthony, Walsh, Dermot, Kendler, Kenneth S, Chen, Xiangning, The International Schizophrenia Consortium

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Common polygenic variation in coeliac disease and confirmation of znf335 and nifa as disease susceptibility loci von Coleman, Ciara, Quinn, Emma M, Ryan, Anthony W, Conroy, Judith, Trimble, Valerie, Mahmud, Nasir, Kennedy, Nicholas, Corvin, Aiden P, Morris, Derek W, Donohoe, Gary, O'Morain, Colm, MacMathuna, Padraic, Byrnes, Valerie, Kiat, Clifford, Trynka, Gosia, Wijmenga, Cisca, Kelleher, Dermot, Ennis, Sean, Anney, Richard JL, McManus, Ross

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Genetic classification of populations using supervised learning von Bridges, Michael, Heron, Elizabeth A, O'Dushlaine, Colm, Segurado, Ricardo, Morris, Derek, Corvin, Aiden, Gill, Michael, Pinto, Carlos

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Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFN[gamma] Regulation: e0140049 von Quinn, Emma M, Coleman, Ciara, Molloy, Ben, Castro, Patricia Dominguez, Cormican, Paul, Trimble, Valerie, Mahmud, Nasir, McManus, Ross

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