PCB: A pseudotemporal causality-based Bayesian approach to identify EMT-associated regulatory relationships of AS events and RBPs during breast cancer progression von Sun, Liangjie, Qiu, Yushan, Ching, Wai-Ki, Zhao, Pu, Zou, Quan

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Sustainable Development Goals, Financial Inclusion, and Grain Security Efficiency von Jia, Shuaishuai, Qiu, Yushan, Yang, Cunyi

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Identification of a comprehensive alternative splicing function during epithelial-mesenchymal transition von Qiu, Yushan, Zhang, Yahong, Tian, Liwen, Zou, Quan, Zhao, Pu

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Genome-Wide Identification of B-Box Family Genes and Their Potential Roles in Seed Development under Shading Conditions in Rapeseed von Chen, Si, Qiu, Yushan, Lin, Yannong, Zou, Songling, Wang, Hailing, Zhao, Huiyan, Shen, Shulin, Wang, Qinghui, Wang, Qiqi, Du, Hai, Li, Jiana, Qu, Cunmin

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Exact Identification of the Structure of a Probabilistic Boolean Network from Samples von Xiaoqing Cheng, Mori, Tomoya, Yushan Qiu, Wai-Ki Ching, Akutsu, Tatsuya

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MDICC: novel method for multi-omics data integration and cancer subtype identification von Yang, Ying, Tian, Sha, Qiu, Yushan, Zhao, Pu, Zou, Quan

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ConSpaS: a contrastive learning framework for identifying spatial domains by integrating local and global similarities von Wu, Siyao, Qiu, Yushan, Cheng, Xiaoqing

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Exploring Observability of Attractor Cycles in Boolean Networks for Biomarker Detection von Qiu, Yushan, Huang, Yulong, Tan, Shaobo, Li, Dongqi, Van Der Zijp-Tan, Ada Chaeli, Borchert, Glen M., Jiang, Hao, Huang, Jingshan

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Matrix factorization-based data fusion for the prediction of RNA-binding proteins and alternative splicing event associations during epithelial-mesenchymal transition von Qiu, Yushan, Ching, Wai-Ki, Zou, Quan

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scMNMF: a novel method for single-cell multi-omics clustering based on matrix factorization von Qiu, Yushan, Guo, Dong, Zhao, Pu, Zou, Quan

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SMCC: A Novel Clustering Method for Single- and Multi-Omics Data Based on Co-Regularized Network Fusion von Tian, Sha, Yang, Ying, Qiu, Yushan, Zou, Quan

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A combinatorially regulated RNA splicing signature predicts breast cancer EMT states and patient survival von Qiu, Yushan, Lyu, Jingyi, Dunlap, Mikayla, Harvey, Samuel E., Cheng, Chonghui

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Coregulation of alternative splicing by hnRNPM and ESRP1 during EMT von Harvey, Samuel E, Xu, Yilin, Lin, Xiaodan, Gao, Xin D, Qiu, Yushan, Ahn, Jaegyoon, Xiao, Xinshu, Cheng, Chonghui

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AGML: Adaptive Graph-based Multi-label Learning for Prediction of RBP and AS Event Associations During EMT von Qiu, Yushan, Chen, Wensheng, Ching, Wai-Ki, Cai, Hongmin, Jiang, Hao, Zou, Quan

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On predicting epithelial mesenchymal transition by integrating RNA-binding proteins and correlation data via L 1/2 -regularization method von Qiu, Yushan, Jiang, Hao, Ching, Wai-Ki, Ng, Michael K

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Drug Side-Effect Profiles Prediction: From Empirical to Structural Risk Minimization von Jiang, Hao, Qiu, Yushan, Hou, Wenpin, Cheng, Xiaoqing, Yim, Man Yi, Ching, Wai-Ki

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On predicting epithelial mesenchymal transition by integrating RNA-binding proteins and correlation data via L1/2-regularization method von Qiu, Yushan, Jiang, Hao, Ching, Wai-Ki, Ng, Michael K.

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Discovery of Boolean metabolic networks: integer linear programming based approach von Qiu, Yushan, Jiang, Hao, Ching, Wai-Ki, Cheng, Xiaoqing

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Optimal projection method determination by Logdet Divergence and perturbed von-Neumann Divergence von Jiang, Hao, Ching, Wai-Ki, Qiu, Yushan, Cheng, Xiao-Qing

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Integer programming-based method for observability of singleton attractors in Boolean networks von Cheng, Xiaoqing, Qiu, Yushan, Hou, Wenpin, Ching, Wai-Ki

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