High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios von Byrska-Bishop, Marta, Evani, Uday S, Zhao, Xuefang, Basile, Anna O, Abel, Haley J, Regier, Allison A, Corvelo, André, Clarke, Wayne E, Musunuri, Rajeeva, Nagulapalli, Kshithija, Fairley, Susan, Runnels, Alexi, Winterkorn, Lara, Lowy, Ernesto, Paul Flicek, Germer, Soren, Brand, Harrison, Hall, Ira M, Talkowski, Michael E, Narzisi, Giuseppe, Zody, Michael C

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Genome and transcriptome analyses provide insight into the euryhaline adaptation mechanism of Crassostrea gigas von Meng, Jie, Zhu, Qihui, Zhang, Linlin, Li, Chunyan, Li, Li, She, Zhicai, Huang, Baoyu, Zhang, Guofan

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Liriodendron genome sheds light on angiosperm phylogeny and species–pair differentiation von Chen, Jinhui, Hao, Zhaodong, Guang, Xuanmin, Zhao, Chenxi, Wang, Pengkai, Xue, Liangjiao, Zhu, Qihui, Yang, Linfeng, Sheng, Yu, Zhou, Yanwei, Xu, Haibin, Xie, Hongqing, Long, Xiaofei, Zhang, Jin, Wang, Zhangrong, Shi, Mingming, Lu, Ye, Liu, Siqin, Guan, Lanhua, Zhu, Qianhua, Yang, Liming, Ge, Song, Cheng, Tielong, Laux, Thomas, Gao, Qiang, Peng, Ye, Liu, Na, Yang, Sihai, Shi, Jisen

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Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes. [Erratum: 2005 Aug., v. 167, no. 2, p. 632.] von Zhu, Qihui, Ge, Song

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Identification and Characterization of Dimorphic Expression of Sex-Related Genes in Rock Bream, a Fish With Multiple Sex Chromosomes von Li, Huan, Zhu, Qihui, Chen, Ruiyi, Liu, Mingtao, Xu, Dongdong

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Identification of HSF1 Target Genes Involved in Thermal Stress in the Pacific Oyster Crassostrea gigas by ChIP-seq von Liu, Youli, Zhu, Qihui, Li, Li, Wang, Wei, Zhang, Guofan

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Sex-Specific Genomic Region Identification and Molecular Sex Marker Development of Rock Bream (Oplegnathus fasciatus) von Gong, Jie, Li, Bijun, Zhao, Ji, Zhou, Zhixiong, Ke, Qiaozhen, Zhu, Qihui, Xu, Dongdong, Zhou, Tao, Xu, Peng

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Multilocus Analysis of Nucleotide Variation of Oryza sativa and Its Wild Relatives: Severe Bottleneck during Domestication of Rice von Zhu, Qihui, Zheng, Xiaoming, Luo, Jingchu, Gaut, Brandon S., Ge, Song

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Discovery of a first-in-class orally available HBV cccDNA inhibitor von Wang, Li, Zhu, Qihui, Zhang, Jitao David, Zhang, Yaling, Ni, Xiaoju, Xiang, Kunlun, Jiang, Jiaxi, Li, Baocun, Yu, Youjun, Hu, Hui, Zhang, Meifang, Wu, Waikwong, Zeng, Jing, Yan, Zhipeng, Dai, Jieyu, Sun, Kai, Zhang, Xin, Chen, Dongdong, Feng, Song, Sach-Peltason, Lisa, Young, John A.T., Gao, Lu

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Profiling variable-number tandem repeat variation across populations using repeat-pangenome graphs von Lu, Tsung-Yu, Chaisson, Mark J. P.

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Efficacy of fecal microbiota transplantation in patients with Parkinson's disease: clinical trial results from a randomized, placebo-controlled design von Cheng, Yi, Tan, Guohua, Zhu, Qihui, Wang, Chun, Ruan, Guangcong, Ying, Senhong, Qie, Jinlong, Hu, Xiaofei, Xiao, Zhifeng, Xu, Fenghua, Chen, Lu, Chen, Minjia, Pei, Yang, Zhang, Hao, Tian, Yuting, Chen, Dongfeng, Liu, Xingyin, Huang, Heqing, Wei, Yanling

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A novel treatment strategy for lapatinib resistance in a subset of HER2-amplified gastric cancer von Ning, Gang, Zhu, Qihui, Kang, Wonyoung, Lee, Hamin, Maher, Leigh, Suh, Yun-Suhk, Michaud, Michael, Silva, Mayerlin, Kwon, Jee Young, Zhang, Chengsheng, Lee, Charles

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Comparative Transcriptome Analyses Characterize Expression Signatures Among Males, Females, Neo-Males, and Gynogenetic Females in the Yellow Drum ( Nibea albiflora ) von Zhu, Qihui, Qin, Zeqian, Chen, Ruiyi, Wang, Ligai, Tan, Peng, Xu, Dongdong

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Chromosome-scale assembly and high-density genetic map of the yellow drum, Nibea albiflora von Xu, Dongdong, Zhang, Wanchang, Chen, Ruiyi, Song, Hongbin, Tian, Lu, Tan, Peng, Wang, Ligai, Zhu, Qihui, Wu, Bin, Lou, Bao, Min, Jiumeng, Zhou, Juhong

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FusorSV: an algorithm for optimally combining data from multiple structural variation detection methods von Becker, Timothy, Lee, Wan-Ping, Leone, Joseph, Zhu, Qihui, Zhang, Chengsheng, Liu, Silvia, Sargent, Jack, Shanker, Kritika, Mil-Homens, Adam, Cerveira, Eliza, Ryan, Mallory, Cha, Jane, Navarro, Fabio C P, Galeev, Timur, Gerstein, Mark, Mills, Ryan E, Shin, Dong-Guk, Lee, Charles, Malhotra, Ankit

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TeXP: Deconvolving the effects of pervasive and autonomous transcription of transposable elements von Navarro, Fabio Cp, Hoops, Jacob, Bellfy, Lauren, Cerveira, Eliza, Zhu, Qihui, Zhang, Chengsheng, Lee, Charles, Gerstein, Mark B

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De novo single-nucleotide and copy number variation in discordant monozygotic twins reveals disease-related genes von Vadgama, Nirmal, Pittman, Alan, Simpson, Michael, Nirmalananthan, Niranjanan, Murray, Robin, Yoshikawa, Takeo, De Rijk, Peter, Rees, Elliott, Kirov, George, Hughes, Deborah, Fitzgerald, Tomas, Kristiansen, Mark, Pearce, Kerra, Cerveira, Eliza, Zhu, Qihui, Zhang, Chengsheng, Lee, Charles, Hardy, John, Nasir, Jamal

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Selection on grain shattering genes and rates of rice domestication von Zhang, Lin-Bin, Zhu, Qihui, Wu, Zhi-Qiang, Ross-Ibarra, Jeffrey, Gaut, Brandon S, Ge, Song, Sang, Tao

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Statistical inference of chromosomal homology based on gene colinearity and applications to Arabidopsis and rice von Wang, Xiyin, Shi, Xiaoli, Li, Zhe, Zhu, Qihui, Kong, Lei, Tang, Wen, Ge, Song, Luo, Jingchu

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The Detection of a Functional 168 bp Deletion of the HOXB13 Gene Determining Short Tail and Its Association with Senior Growth Traits in Sheep Breeds Worldwide von Zhu, Qihui, Liu, Peiyao, Zhang, Mingshi, Kang, Yuxin, Lv, Linmi, Xu, Hongwei, Zhang, Qingfeng, Li, Ran, Pan, Chuanying, Lan, Xianyong

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