Integrated proteotranscriptomics of breast cancer reveals globally increased protein-mRNA concordance associated with subtypes and survival von Tang, Wei, Zhou, Ming, Dorsey, Tiffany H, Prieto, DaRue A, Wang, Xin W, Ruppin, Eytan, Veenstra, Timothy D, Ambs, Stefan

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Del-1, an Endogenous Leukocyte-Endothelial Adhesion Inhibitor, Limits Inflammatory Cell Recruitment von Choi, Eun Young, Chavakis, Emmanouil, Czabanka, Marcus A, Langer, Harald F, Fraemohs, Line, Economopoulou, Matina, Kundu, Ramendra K, Orlandi, Alessia, Zheng, Ying Yi, Prieto, DaRue A, Ballantyne, Christie M, Constant, Stephanie L, Aird, William C, Papayannopoulou, Thalia, Gahmberg, Carl G, Udey, Mark C, Vajkoczy, Peter, Quertermous, Thomas, Dimmeler, Stefanie, Weber, Christian, Chavakis, Triantafyllos

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Characterization of the Low Molecular Weight Human Serum Proteome von Tirumalai, Radhakrishna S, Chan, King C, Prieto, DaRue A, Issaq, Haleem J, Conrads, Thomas P, Veenstra, Timothy D

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Approaching Solid Tumor Heterogeneity on a Cellular Basis by Tissue Proteomics Using Laser Capture Microdissection and Biological Mass Spectrometry von Johann, Donald J, Rodriguez-Canales, Jaime, Mukherjee, Sumana, Prieto, DaRue A, Hanson, Jeffrey C, Emmert-Buck, Michael, Blonder, Josip

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Engineered Human Antibody Constant Domains with Increased Stability von Gong, Rui, Vu, Bang K., Feng, Yang, Prieto, DaRue A., Dyba, Marzena A., Walsh, Joseph D., Prabakaran, Ponraj, Veenstra, Timothy D., Tarasov, Sergey G., Ishima, Rieko, Dimitrov, Dimiter S.

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Increased Serum Levels of Complement C3a Anaphylatoxin Indicate the Presence of Colorectal Tumors von Habermann, Jens K., Roblick, Uwe J., Luke, Brian T., Prieto, Darue A., Finlay, William J.J., Podust, Vladimir N., Roman, John M., Oevermann, Elisabeth, Schiedeck, Thomas, Homann, Nils, Duchrow, Michael, Conrads, Thomas P., Veenstra, Timothy D., Burt, Stanley K., Bruch, Hans–Peter, Auer, Gert, Ried, Thomas

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Organic solvent extraction of proteins and peptides from serum as an effective sample preparation for detection and identification of biomarkers by mass spectrometry von Chertov, Oleg, Biragyn, Arya, Kwak, Larry W., Simpson, John T., Boronina, Tatiana, Hoang, Van M., Prieto, DaRue A., Conrads, Thomas P., Veenstra, Timothy D., Fisher, Robert J.

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Protocol for the Analysis of Laser Capture Microdissected Fresh-Frozen Tissue Homogenates by Silver-Stained 1D SDS-PAGE von Prieto, DaRue A., Whitely, Gordon, Johann, Donald J., Blonder, Josip

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Proteomic analysis of traumatic brain injury: the search for biomarkers von Prieto, DaRue A, Ye, Xiaoying, Veenstra, Timothy D

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Increased Peripheral Expansion of Naive CD4+ T Cells in vivo after IL-2 Treatment of Patients with HIV Infection von Natarajan, Ven, Lempicki, Richard A., Sereti, Irini, Badralmaa, Yunden, Adelsberger, Joseph W., Metcalf, Julia A., Prieto, Darue A., Stevens, Randy, Baseler, Michael W., Kovacs, Joseph A., Lane, H. Clifford

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Preparation and Immunoaffinity Depletion of Fresh Frozen Tissue Homogenates for Mass Spectrometry-Based Proteomics in the Context of Drug Target/Biomarker Discovery von Prieto, DaRue A., Chan, King C., Johann, Donald J., Ye, Xiaoying, Whitely, Gordon, Blonder, Josip

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Mammalian cell transient expression, non-affinity purification, and characterization of human recombinant IGFBP7, an IGF-1 targeting therapeutic protein von Jiang, Man-Shiow, Yang, Xiaoyi, Esposito, Dominic, Nelson, Earl, Yuan, Jinhui, Hopkins, Ralph F., Broadt, Trevor, Xiao, Zhen, Colantonio, Simona, Prieto, DaRue A., Welch, Anthony R., Creekmore, Stephen P., Mitra, George, Zhu, Jianwei

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Combined Blood/Tissue Analysis for Cancer Biomarker Discovery: Application to Renal Cell Carcinoma von Johann, Donald J, Wei, Bih-Rong, Prieto, DaRue A, Chan, King C, Ye, Xiaying, Valera, Vladimir A, Simpson, R. Mark, Rudnick, Paul A, Xiao, Zhen, Issaq, Haleem J, Linehan, W. Marston, Stein, Stephen E, Veenstra, Timothy D, Blonder, Josip

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Optimized method for computing (18)O/(16)O ratios of differentially stable-isotope labeled peptides in the context of postdigestion (18)O exchange/labeling von Ye, Xiaoying, Luke, Brian T, Johann, Jr, Donald J, Ono, Akira, Prieto, Darue A, Chan, King C, Issaq, Haleem J, Veenstra, Timothy D, Blonder, Josip

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Proteomic Profiling of H-Ras-G12V Induced Hypertrophic Cardiomyopathy in Transgenic Mice Using Comparative LC-MS Analysis of Thin Fresh-Frozen Tissue Sections von Wei, Bih-Rong, Simpson, R. Mark, Johann, Donald J, Dwyer, Jennifer E, Prieto, DaRue A, Kumar, Mia, Ye, Xiaoying, Luke, Brian, Shive, Heather R, Webster, Joshua D, Hoover, Shelley B, Veenstra, Timothy D, Blonder, Josip

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Profiling the erythrocyte membrane proteome isolated from patients diagnosed with chronic obstructive pulmonary disease von Alexandre, Bruno M., Charro, Nuno, Blonder, Josip, Lopes, Carlos, Azevedo, Pilar, Bugalho de Almeida, António, Chan, King C., Prieto, DaRue A., Issaq, Haleem, Veenstra, Timothy D., Penque, Deborah

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Proteomic patterns for early cancer detection von Veenstra, Timothy D., Prieto, DaRue A., Conrads, Thomas P.

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Liquid Tissue™: proteomic profiling of formalin-fixed tissues von Prieto, Darue A, Hood, Brian L, Darfler, Marlene M, Guiel, Thomas G, Lucas, David A, Conrads, Thomas P, Veenstra, Timothy D, Krizman, David B

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Proteomic Analysis of Frozen Tissue Samples Using Laser Capture Microdissection von Mukherjee, Sumana, Rodriguez-Canales, Jaime, Hanson, Jeffrey, Emmert-Buck, Michael R., Tangrea, Michael A., Prieto, DaRue A., Blonder, Josip, Johann, Donald J.

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Separation and Purification of Plasmid Mixtures by Continuous Elution Electrophoresis von Prieto, DaRue A, Harvey, Linda K, Nelson, Edward L

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