Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression von Sun, Qinyu, Hao, Qinyu, Prasanth, Kannanganattu V.

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Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB von Tripathi, Vidisha, Shen, Zhen, Chakraborty, Arindam, Giri, Sumanprava, Freier, Susan M, Wu, Xiaolin, Zhang, Yongqing, Gorospe, Myriam, Prasanth, Supriya G, Lal, Ashish, Prasanth, Kannanganattu V

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A natural antisense lncRNA controls breast cancer progression by promoting tumor suppressor gene mRNA stability von Jadaliha, Mahdieh, Gholamalamdari, Omid, Tang, Wei, Zhang, Yang, Petracovici, Ana, Hao, Qinyu, Tariq, Aamira, Kim, Tae Gyoon, Holton, Sarah E, Singh, Deepak K, Li, Xiao Ling, Freier, Susan M, Ambs, Stefan, Bhargava, Rohit, Lal, Ashish, Prasanth, Supriya G, Ma, Jian, Prasanth, Kannanganattu V

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Quantitative analysis of multilayer organization of proteins and RNA in nuclear speckles at super resolution von Fei, Jingyi, Jadaliha, Mahdieh, Harmon, Tyler S, Li, Isaac T S, Hua, Boyang, Hao, Qinyu, Holehouse, Alex S, Reyer, Matthew, Sun, Qinyu, Freier, Susan M, Pappu, Rohit V, Prasanth, Kannanganattu V, Ha, Taekjip

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Regulatory roles of nucleolus organizer region-derived long non-coding RNAs von Hao, Qinyu, Prasanth, Kannanganattu V.

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Long Noncoding RNA MALAT1 Promotes Hepatocellular Carcinoma Development by SRSF1 Upregulation and mTOR Activation von Malakar, Pushkar, Shilo, Asaf, Mogilevsky, Adi, Stein, Ilan, Pikarsky, Eli, Nevo, Yuval, Benyamini, Hadar, Elgavish, Sharona, Zong, Xinying, Prasanth, Kannanganattu V, Karni, Rotem

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The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation von Tripathi, Vidisha, Ellis, Jonathan D., Shen, Zhen, Song, David Y., Pan, Qun, Watt, Andrew T., Freier, Susan M., Bennett, C. Frank, Sharma, Alok, Bubulya, Paula A., Blencowe, Benjamin J., Prasanth, Supriya G., Prasanth, Kannanganattu V.

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A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression von Bernard, Delphine, Prasanth, Kannanganattu V, Tripathi, Vidisha, Colasse, Sabrina, Nakamura, Tetsuya, Xuan, Zhenyu, Zhang, Michael Q, Sedel, Frédéric, Jourdren, Laurent, Coulpier, Fanny, Triller, Antoine, Spector, David L, Bessis, Alain

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Eukaryotic regulatory RNAs: an answer to the 'genome complexity' conundrum von Prasanth, Kannanganattu V, Spector, David L

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Functional and prognostic significance of long non-coding RNA MALAT1 as a metastasis driver in ER negative lymph node negative breast cancer von Jadaliha, Mahdieh, Zong, Xinying, Malakar, Pushkar, Ray, Tania, Singh, Deepak K, Freier, Susan M, Jensen, Tor, Prasanth, Supriya G, Karni, Rotem, Ray, Partha S, Prasanth, Kannanganattu V

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MIR100 host gene-encoded lncRNAs regulate cell cycle by modulating the interaction between HuR and its target mRNAs von Sun, Qinyu, Tripathi, Vidisha, Yoon, Je-Hyun, Singh, Deepak K, Hao, Qinyu, Min, Kyung-Won, Davila, Sylvia, Zealy, Richard W, Li, Xiao Ling, Polycarpou-Schwarz, Maria, Lehrmann, Elin, Zhang, Yongqing, Becker, Kevin G, Freier, Susan M, Zhu, Yuelin, Diederichs, Sven, Prasanth, Supriya G, Lal, Ashish, Gorospe, Myriam, Prasanth, Kannanganattu V

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Human origin recognition complex is essential for HP1 binding to chromatin and heterochromatin organization von Prasanth, Supriya G., Shen, Zhen, Prasanth, Kannanganattu V., Stillman, Bruce

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Monoallelically expressed noncoding RNAs form nucleolar territories on NOR-containing chromosomes and regulate rRNA expression von Hao, Qinyu, Liu, Minxue, Daulatabad, Swapna Vidhur, Gaffari, Saba, Song, You Jin, Srivastava, Rajneesh, Bhaskar, Shivang, Moitra, Anurupa, Mangan, Hazel, Tseng, Elizabeth, Gilmore, Rachel B, Frier, Susan M, Chen, Xin, Wang, Chengliang, Huang, Sui, Chamberlain, Stormy, Jin, Hong, Korlach, Jonas, McStay, Brian, Sinha, Saurabh, Janga, Sarath Chandra, Prasanth, Supriya G, Prasanth, Kannanganattu V

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Long Noncoding RNA PURPL Suppresses Basal p53 Levels and Promotes Tumorigenicity in Colorectal Cancer von Li, Xiao Ling, Subramanian, Murugan, Jones, Matthew F., Chaudhary, Ritu, Singh, Deepak K., Zong, Xinying, Gryder, Berkley, Sindri, Sivasish, Mo, Min, Schetter, Aaron, Wen, Xinyu, Parvathaneni, Swetha, Kazandjian, Dickran, Jenkins, Lisa M., Tang, Wei, Elloumi, Fathi, Martindale, Jennifer L., Huarte, Maite, Zhu, Yuelin, Robles, Ana I., Frier, Susan M., Rigo, Frank, Cam, Maggie, Ambs, Stefan, Sharma, Sudha, Harris, Curtis C., Dasso, Mary, Prasanth, Kannanganattu V., Lal, Ashish

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PCNA-mediated stabilization of E3 ligase RFWD3 at the replication fork is essential for DNA replication von Lin, Yo-Chuen, Wang, Yating, Hsu, Rosaline, Giri, Sumanprava, Wopat, Susan, Arif, Mariam K., Chakraborty, Arindam, Prasanth, Kannanganattu V., Prasanth, Supriya G.

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Prosurvival long noncoding RNA PINCR regulates a subset of p53 targets in human colorectal cancer cells by binding to Matrin 3 von Chaudhary, Ritu, Gryder, Berkley, Woods, Wendy S, Subramanian, Murugan, Jones, Matthew F, Li, Xiao Ling, Jenkins, Lisa M, Shabalina, Svetlana A, Mo, Min, Dasso, Mary, Yang, Yuan, Wakefield, Lalage M, Zhu, Yuelin, Frier, Susan M, Moriarity, Branden S, Prasanth, Kannanganattu V, Perez-Pinera, Pablo, Lal, Ashish

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Splicing factor SRSF1 deficiency in the liver triggers NASH-like pathology and cell death von Arif, Waqar, Mathur, Bhoomika, Saikali, Michael F., Chembazhi, Ullas V., Toohill, Katelyn, Song, You Jin, Hao, Qinyu, Karimi, Saman, Blue, Steven M., Yee, Brian A., Van Nostrand, Eric L., Bangru, Sushant, Guzman, Grace, Yeo, Gene W., Prasanth, Kannanganattu V., Anakk, Sayeepriyadarshini, Cummins, Carolyn L., Kalsotra, Auinash

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PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity von Yoon, Je-Hyun, De, Supriyo, Srikantan, Subramanya, Abdelmohsen, Kotb, Grammatikakis, Ioannis, Kim, Jiyoung, Kim, Kyoung Mi, Noh, Ji Heon, White, Elizabeth J. F., Martindale, Jennifer L., Yang, Xiaoling, Kang, Min-Ju, Wood, William H., Hooten, Nicole Noren, Evans, Michele K., Becker, Kevin G., Tripathi, Vidisha, Prasanth, Kannanganattu V., Wilson, Gerald M., Tuschl, Thomas, Ingolia, Nicholas T., Hafner, Markus, Gorospe, Myriam

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LncRNA-mediated regulation of SOX9 expression in basal subtype breast cancer cells von Tariq, Aamira, Hao, Qinyu, Sun, Qinyu, Singh, Deepak K., Jadaliha, Mahdieh, Zhang, Yang, Chetlangia, Neha, Ma, Jian, Holton, Sarah E., Bhargava, Rohit, Lal, Ashish, Prasanth, Supriya G., Prasanth, Kannanganattu V.

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ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins von Anantharaman, Aparna, Tripathi, Vidisha, Khan, Abid, Yoon, Je-Hyun, Singh, Deepak K, Gholamalamdari, Omid, Guang, Shuomeng, Ohlson, Johan, Wahlstedt, Helene, Öhman, Marie, Jantsch, Michael F, Conrad, Nicholas K, Ma, Jian, Gorospe, Myriam, Prasanth, Supriya G, Prasanth, Kannanganattu V

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