Using both qualitative and quantitative data in parameter identification for systems biology models von Mitra, Eshan D., Dias, Raquel, Posner, Richard G., Hlavacek, William S.

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Daily Forecasting of Regional Epidemics of Coronavirus Disease with Bayesian Uncertainty Quantification, United States von Lin, Yen Ting, Neumann, Jacob, Miller, Ely F., Posner, Richard G., Mallela, Abhishek, Safta, Cosmin, Ray, Jaideep, Thakur, Gautam, Chinthavali, Supriya, Hlavacek, William S.

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Targeting the tumor microenvironment in cancer: why hyaluronidase deserves a second look von Whatcott, Clifford J, Han, Haiyong, Posner, Richard G, Hostetter, Galen, Von Hoff, Daniel D

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Bayesian Inference of State-Level COVID-19 Basic Reproduction Numbers across the United States von Mallela, Abhishek, Neumann, Jacob, Miller, Ely F, Chen, Ye, Posner, Richard G, Lin, Yen Ting, Hlavacek, William S

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Clinical study of genomic drivers in pancreatic ductal adenocarcinoma von Barrett, Michael T, Deiotte, Ray, Lenkiewicz, Elizabeth, Malasi, Smriti, Holley, Tara, Evers, Lisa, Posner, Richard G, Jones, Timothy, Han, Haiyong, Sausen, Mark, Velculescu, Victor E, Drebin, Jeffrey, O'Dwyer, Peter, Jameson, Gayle, Ramanathan, Ramesh K, Von Hoff, Daniel D

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PyBioNetFit and the Biological Property Specification Language von Mitra, Eshan D., Suderman, Ryan, Colvin, Joshua, Ionkov, Alexander, Hu, Andrew, Sauro, Herbert M., Posner, Richard G., Hlavacek, William S.

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Dissecting RAF Inhibitor Resistance by Structure-based Modeling Reveals Ways to Overcome Oncogenic RAS Signaling von Rukhlenko, Oleksii S., Khorsand, Fahimeh, Krstic, Aleksandar, Rozanc, Jan, Alexopoulos, Leonidas G., Rauch, Nora, Erickson, Keesha E., Hlavacek, William S., Posner, Richard G., Gómez-Coca, Silvia, Rosta, Edina, Fitzgibbon, Cheree, Matallanas, David, Rauch, Jens, Kolch, Walter, Kholodenko, Boris N.

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Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor von Erickson, Keesha E, Rukhlenko, Oleksii S, Shahinuzzaman, Md, Slavkova, Kalina P, Lin, Yen Ting, Suderman, Ryan, Stites, Edward C, Anghel, Marian, Posner, Richard G, Barua, Dipak, Kholodenko, Boris N, Hlavacek, William S

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Use of Mechanistic Models to Integrate and Analyze Multiple Proteomic Datasets von Stites, Edward C., Aziz, Meraj, Creamer, Matthew S., Von Hoff, Daniel D., Posner, Richard G., Hlavacek, William S.

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RuleMonkey: software for stochastic simulation of rule-based models von Colvin, Joshua, Monine, Michael I, Gutenkunst, Ryan N, Hlavacek, William S, Von Hoff, Daniel D, Posner, Richard G

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AutoDock VinaXB: implementation of XBSF, new empirical halogen bond scoring function, into AutoDock Vina von Koebel, Mathew R., Schmadeke, Grant, Posner, Richard G., Sirimulla, Suman

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Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states (Arizona, Colorado, Ne... von Miller, Ely F, Neumann, Jacob, Chen, Ye, Mallela, Abhishek, Lin, Yen Ting, Hlavacek, William S, Posner, Richard G

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Computational model for autophagic vesicle dynamics in single cells von Martin, Katie R., Barua, Dipak, Kauffman, Audra L., Westrate, Laura M., Posner, Richard G., Hlavacek, William S., MacKeigan, Jeffrey P.

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Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit von Neumann, Jacob, Lin, Yen Ting, Mallela, Abhishek, Miller, Ely F, Colvin, Joshua, Duprat, Abell T, Chen, Ye, Hlavacek, William S, Posner, Richard G

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New insights into RAS biology reinvigorate interest in mathematical modeling of RAS signaling von Erickson, Keesha E., Rukhlenko, Oleksii S., Posner, Richard G., Hlavacek, William S., Kholodenko, Boris N.

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Predominance of activated EGFR higher-order oligomers on the cell surface von Clayton, Andrew H. A., Orchard, Suzanne G., Nice, Edouard C., Posner, Richard G., Burgess, Antony W.

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Impacts of Vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 Variants Alpha and Delta on Coronavirus Disease 2019 Transmission Dynamics in Four Metropolitan Areas of... von Mallela, Abhishek, Chen, Ye, Lin, Yen Ting, Miller, Ely F., Neumann, Jacob, He, Zhili, Nelson, Kathryn E., Posner, Richard G., Hlavacek, William S.

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BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments von Thomas, Brandon R, Chylek, Lily A, Colvin, Joshua, Sirimulla, Suman, Clayton, Andrew H A, Hlavacek, William S, Posner, Richard G

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Steric Effects on Multivalent Ligand-Receptor Binding: Exclusion of Ligand Sites by Bound Cell Surface Receptors von Hlavacek, William S., Posner, Richard G., Perelson, Alan S.

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CO2 transduction mechanisms in avian intrapulmonary chemoreceptors: experiments and models von HEMPLEMAN, Steven C, POSNER, Richard G

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