PERFORMANCE OF BRIDGES DURING SAN FERNANDO EARTHQUAKE von Pond, W. F.

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Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology von Delport, Wayne, Poon, Art F. Y., Frost, Simon D. W., Kosakovsky Pond, Sergei L.

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HyPhy 2.5—A Customizable Platform for Evolutionary Hypothesis Testing Using Phylogenies von Kosakovsky Pond, Sergei L, Poon, Art F Y, Velazquez, Ryan, Weaver, Steven, Hepler, N Lance, Murrell, Ben, Shank, Stephen D, Magalis, Brittany Rife, Bouvier, Dave, Nekrutenko, Anton, Wisotsky, Sadie, Spielman, Stephanie J, Frost, Simon D W, Muse, Spencer V

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Selection Analysis Identifies Clusters of Unusual Mutational Changes in Omicron Lineage BA.1 That Likely Impact Spike Function von Martin, Darren P., Lytras, Spyros, Lucaci, Alexander G., Maier, Wolfgang, Grüning, Björn, Shank, Stephen D., Weaver, Steven, MacLean, Oscar A., Orton, Richard J., Lemey, Philippe, Boni, Maciej F., Tegally, Houriiyah, Harkins, Gordon W., Scheepers, Cathrine, Bhiman, Jinal N., Everatt, Josie, Amoako, Daniel G., San, James Emmanuel, Giandhari, Jennifer, Sigal, Alex, Williamson, Carolyn, Hsiao, Nei-yuan, von Gottberg, Anne, De Klerk, Arne, Shafer, Robert W., Robertson, David L., Wilkinson, Robert J., Sewell, B. Trevor, Lessells, Richard, Nekrutenko, Anton, Greaney, Allison J., Starr, Tyler N., Bloom, Jesse D., Murrell, Ben, Wilkinson, Eduan, Gupta, Ravindra K., de Oliveira, Tulio, Kosakovsky Pond, Sergei L.

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The Dark Energy Survey Image Processing Pipeline von Morganson, E., Gruendl, R. A., Menanteau, F., Kind, M. Carrasco, Chen, Y.-C., Daues, G., Drlica-Wagner, A., Friedel, D. N., Gower, M., Johnson, M. W. G., Johnson, M. D., Kessler, R., Paz-Chinchón, F., Petravick, D., Pond, C., Yanny, B., Allam, S., Armstrong, R., Barkhouse, W., Bechtol, K., Benoit-Lévy, A., Bernstein, G. M., Bertin, E., Buckley-Geer, E., Covarrubias, R., Desai, S., Diehl, H. T., Goldstein, D. A., Gruen, D., Li, T. S., Lin, H., Marriner, J., Mohr, J. J., Neilsen, E., Ngeow, C.-C., Paech, K., Rykoff, E. S., Sako, M., Sevilla-Noarbe, I., Sheldon, E., Sobreira, F., Tucker, D. L., Wester, W.

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Cognitive function and fatigue after diagnosis of colorectal cancer von Vardy, J., Dhillon, H.M., Pond, G.R., Rourke, S.B., Xu, W., Dodd, A., Renton, C., Park, A., Bekele, T., Ringash, J., Zhang, H., Burkes, R., Clarke, S.J., Tannock, I.F.

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An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1 von Kosakovsky Pond, Sergei L, Posada, David, Stawiski, Eric, Chappey, Colombe, Poon, Art F Y, Hughes, Gareth, Fearnhill, Esther, Gravenor, Mike B, Leigh Brown, Andrew J, Frost, Simon D W

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An evolutionary-network model reveals stratified interactions in the V3 loop of the HIV-1 envelope von Poon, Art F Y, Lewis, Fraser I, Pond, Sergei L Kosakovsky, Frost, Simon D W

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Polymorphism Data Assist Estimation of the Nonsynonymous over Synonymous Fixation Rate Ratio ω for Closely Related Species von Mugal, Carina F, Kutschera, Verena E, Botero-Castro, Fidel, Wolf, Jochen B W, Kaj, Ingemar

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Lifelong physical exercise delays age-associated skeletal muscle decline von Zampieri, S, Pietrangelo, L, Loefler, S, Fruhmann, H, Vogelauer, M, Burggraf, S, Pond, A, Grim-Stieger, M, Cvecka, J, Sedliak, M, Tirpáková, V, Mayr, W, Sarabon, N, Rossini, K, Barberi, L, De Rossi, M, Romanello, V, Boncompagni, S, Musarò, A, Sandri, M, Protasi, F, Carraro, U, Kern, H

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Phylogenetic analysis of population-based and deep sequencing data to identify coevolving sites in the nef gene of HIV-1 von Poon, Art F Y, Swenson, Luke C, Dong, Winnie W Y, Deng, Wenjie, Kosakovsky Pond, Sergei L, Brumme, Zabrina L, Mullins, James I, Richman, Douglas D, Harrigan, P Richard, Frost, Simon D W

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Eisen von Baudisch, O., Ferrich, M., Wainer, E., Campbell, F. H., Hook, R. H., Malkow, A. M., Voyatzakis, E., Jones, H. W., Crossley, H. E., Weeks, Mary Elvira, Smith, G. F., Bliss, H. H., Fleury, P., Marque, J., Seidess, A. S., Ssweschnikowa, W. N., Schorlemmer, K., Tscherny, A. T., Thornton, W. M., Katzoff, S. I., Roseman, R., Ackermann, W., Kaufmann, F., Mathesius, L., Zanko, A. M., Dawydow, A. L., Schollenberger, C. J., Pond, W. F., Agamennone, G., Fioletowa, A. F., Chaikina, S., Park, B., Rescorla, A. R., Fry, E. M., Carnahan, F. L., Bonner, W. D., Romeyn, H., Winter, P. K., Moyer, H. V., Soule, B. A., Furman, N. H., Wilson, E. B., Shishacow, N. A., Spacu, P., Hanuš, J., Vorišek, F., Solaja, B., Matovinovič, V., Jilek, A., Vicovský, V., Robinson, P. L. L., Scott, W. E., Matwejew, N. I., Hazel, F., Serum, C. H., Diepschlag, E., Horn, E., Wöhler, L., Martin, F., Schmidt, E., Schröer, E., Szaffka, T., Stumper, R., Grube, O., Burkser, E., Milgewskaja, W. L., Feldmann, R. W., Egan, J. J., Crafts, W., Kinzel, A. B., Hoyt, S. L., Scheil, M. A., Hare, W., Peterson, L., Soler, G., Scott, F. W., Bogdantschenko, A. G.

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Phosphorbestimmungsmethoden von Le Guyon, R. F., May, R. M., Mc Nabb, W. M., Endr dy, A. v., Willard, H. H., Boldyreff, A. W., Lundell, G. E. F., Hoffman, J. I., Blum, W., Johnson, C. M., Kuhnt, O., Ariano, R., Hudson, R. P., Graziani, F., Losana, L., Burton-Smith, H., Pond, W. F., Pitzer, L. E., Salkin, B., Hinsberg, K., Laszlo, D., Schikorr, G.

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Brain charts for the human lifespan von Bethlehem, R. A. I., Seidlitz, J., White, S. R., Vogel, J. W., Anderson, K. M., Adler, S., Anagnostou, E., Areces-Gonzalez, A., Auyeung, B., Bae, J., Ball, G., Baron-Cohen, S., Beare, R., Beyer, F., Blangero, J., Boardman, J. P., Bosch-Bayard, J. F., Bourke, N., Calhoun, V. D., Chakravarty, M. M., Cole, J. H., Crivello, F., Crossley, N., Delarue, M., Delorme, R., Desrivieres, S., Di Biase, M. A., Donald, K. A., Dunlop, K., Ellis, C. T., Feczko, E., Fletcher, P. C., Gilmore, J. H., Grant, P. E., Gur, R. E., Gur, R. C., Hansson, O., Hedden, T., Heinz, A., Holla, B., Johnson, K. A., Jones, D. T., Kahn, R. S., Kawashima, R., Kelley, E. A., Kern, S., Kim, K. W., Kitzbichler, M. G., Kremen, W. S., Landeau, B., Lerch, J., Liston, C., Lombardo, M. V., Lv, J., Lynch, C., Mallard, T. T., Markello, R. D., Meaney, M. J., Medic, N., Misic, B., Morgan, S. E., Mothersill, D., Ong, M. Q. W., Ortinau, C., Ossenkoppele, R., Palaniyappan, L., Pausova, Z., Pierce, K., Qian, X., Raznahan, A., Rodrigue, A., Rollins, C. K., Ronan, L., Rosenberg, M. D., Schachar, R. J., Schöll, M., Sharp, D., Sperling, R. A., Sullivan, G., Thyreau, B., Turk-Browne, N. B., Tuulari, J. J., Tzourio, C., Vachon-Presseau, É., Valk, S. L., van Amelsvoort, T., Vandekar, S. N., Victoria, L. W., Villeneuve, S., Vértes, P. E., Warrier, V., Witte, A. V., Yang, N., Yeo, B., Zalesky, A., Zar, H. J., Zugman, A., Zuo, X. N., Bullmore, E. T., Alexander-Bloch, A. F.

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Cc2d1a Loss of Function Disrupts Functional and Morphological Development in Forebrain Neurons Leading to Cognitive and Social Deficits von Oaks, Adam W, Zamarbide, Marta, Tambunan, Dimira E, Santini, Emanuela, Di Costanzo, Stefania, Pond, Heather L, Johnson, Mark W, Lin, Jeff, Gonzalez, Dilenny M, Boehler, Jessica F, Wu, Guangying K, Klann, Eric, Walsh, Christopher A, Manzini, M Chiara

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Evolutionary interactions between N-linked glycosylation sites in the HIV-1 envelope von Poon, Art F Y, Lewis, Fraser I, Pond, Sergei L Kosakovsky, Frost, Simon D W

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The Dark Energy Survey Data Release 2 von Abbott, T. M. C., Amon, A., Avila, S., Bacon, D., Banerji, M., Bernstein, G. M., Bertin, E., Bhargava, S., Bridle, S. L., Brooks, D., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Castander, F. J., Cawthon, R., Chang, C., Conselice, C., Crocce, M., De Vicente, J., DeRose, J., Desai, S., Diehl, H. T., Dietrich, J. P., Drlica-Wagner, A., Everett, S., Evrard, A. E., Ferté, A., Fosalba, P., Friedel, D., Frieman, J., García-Bellido, J., Giannantonio, T., Gill, M. S. S., Gruen, D., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hartley, W. G., Hinton, S. R., Hollowood, D. L., Honscheid, K., Huterer, D., Johnson, M. D., Kent, S., Kron, R., Kuehn, K., Kuropatkin, N., Lahav, O., Li, T. S., Lidman, C., MacCrann, N., Manning, T. A., Maloney, J. D., March, M., Marshall, J. L., Martini, P., Menanteau, F., Miquel, R., Morgan, R., Myles, J., Neilsen, E., Ogando, R. L. C., Palmese, A., Paz-Chinchón, F., Pieres, A., Pond, C., Rodriguez-Monroy, M., Romer, A. K., Roodman, A., Sako, M., Santiago, B., Scarpine, V., Serrano, S., Smith, J. Allyn, Soares-Santos, M., Swanson, M. E. C., Tarle, G., Thomas, D., Tremblay, P. E., Tucker, D. L., Turner, D. J., Varga, T. N., Wechsler, R. H., Weller, J., Wester, W., Wilkinson, R. D., Yanny, B., Fitzpatrick, M., Jacques, A., Scott, A., Huang, L., Herrera, D., Juneau, S., Nidever, D., Weaver, B. A., Correia, V., de Freitas, M., Freitas, F. N., Vila-Verde, G.

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Viral CpG Deficiency Provides No Evidence That Dogs Were Intermediate Hosts for SARS-CoV-2 von Pollock, David D, Castoe, Todd A, Perry, Blair W, Lytras, Spyros, Wade, Kristen J, Robertson, David L, Holmes, Edward C, Boni, Maciej F, Kosakovsky Pond, Sergei L, Parry, Rhys, Carlton, Elizabeth J, Wood, James L N, Pennings, Pleuni S, Goldstein, Richard A

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Tuning in to Psychological Change: Linguistic Markers of Psychological Traits and Emotions Over Time in Popular U.S. Song Lyrics von DeWall, C. Nathan, Pond, Richard S, Campbell, W. Keith, Twenge, Jean M

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Spidermonkey: rapid detection of co-evolving sites using Bayesian graphical models von Poon, Art F. Y., Lewis, Fraser I., Frost, Simon D. W., Kosakovsky Pond, Sergei L.

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