pkCSM: Predicting Small-Molecule Pharmacokinetic and Toxicity Properties Using Graph-Based Signatures von Pires, Douglas E. V, Blundell, Tom L, Ascher, David B

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DynaMut2: Assessing changes in stability and flexibility upon single and multiple point missense mutations von Rodrigues, Carlos H.M., Pires, Douglas E.V., Ascher, David B.

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mycoCSM: Using Graph-Based Signatures to Identify Safe Potent Hits against Mycobacteria von Pires, Douglas E. V, Ascher, David B

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DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability von Rodrigues, Carlos HM, Pires, Douglas EV, Ascher, David B

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DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach von Pires, Douglas E V, Ascher, David B, Blundell, Tom L

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mCSM: predicting the effects of mutations in proteins using graph-based signatures von Pires, Douglas E V, Ascher, David B, Blundell, Tom L

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Preventing Digital Overdiagnosis von Capurro, Daniel, Coghlan, Simon, Pires, Douglas E. V

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A structural biology community assessment of AlphaFold2 applications von Akdel, Mehmet, Pires, Douglas E. V., Pardo, Eduard Porta, Jänes, Jürgen, Zalevsky, Arthur O., Mészáros, Bálint, Bryant, Patrick, Good, Lydia L., Laskowski, Roman A., Pozzati, Gabriele, Shenoy, Aditi, Zhu, Wensi, Kundrotas, Petras, Serra, Victoria Ruiz, Rodrigues, Carlos H. M., Dunham, Alistair S., Burke, David, Borkakoti, Neera, Velankar, Sameer, Frost, Adam, Basquin, Jérôme, Lindorff-Larsen, Kresten, Bateman, Alex, Kajava, Andrey V., Valencia, Alfonso, Ovchinnikov, Sergey, Durairaj, Janani, Ascher, David B., Thornton, Janet M., Davey, Norman E., Stein, Amelie, Elofsson, Arne, Croll, Tristan I., Beltrao, Pedro

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mCSM-AB: a web server for predicting antibody-antigen affinity changes upon mutation with graph-based signatures von Pires, Douglas E V, Ascher, David B

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CSM-lig: a web server for assessing and comparing protein-small molecule affinities von Pires, Douglas E V, Ascher, David B

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Understanding and predicting the functional consequences of missense mutations in BRCA1 and BRCA2 von Aljarf, Raghad, Shen, Mengyuan, Pires, Douglas E. V., Ascher, David B.

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mCSM-PPI2: predicting the effects of mutations on protein-protein interactions von Rodrigues, Carlos H M, Myung, Yoochan, Pires, Douglas E V, Ascher, David B

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pdCSM-cancer: Using Graph-Based Signatures to Identify Small Molecules with Anticancer Properties von Al-Jarf, Raghad, de Sá, Alex G. C, Pires, Douglas E. V, Ascher, David B

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mCSM-NA: predicting the effects of mutations on protein-nucleic acids interactions von Pires, Douglas E V, Ascher, David B

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mmCSM-PPI: predicting the effects of multiple point mutations on protein–protein interactions von Rodrigues, Carlos H M, Pires, Douglas E V, Ascher, David B

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mCSM-membrane: predicting the effects of mutations on transmembrane proteins von Pires, Douglas E V, Rodrigues, Carlos H M, Ascher, David B

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Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT von Elangovan, Aparna, Li, Yuan, Pires, Douglas E V, Davis, Melissa J, Verspoor, Karin

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Prediction and Optimization of Pharmacokinetic and Toxicity Properties of the Ligand von Pires, Douglas E. V., Kaminskas, Lisa M., Ascher, David B.

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DDMut: predicting effects of mutations on protein stability using deep learning von Zhou, Yunzhuo, Pan, Qisheng, Pires, Douglas E V, Rodrigues, Carlos H M, Ascher, David B

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Human LC3 and GABARAP subfamily members achieve functional specificity via specific structural modulations von Jatana, Nidhi, Ascher, David B., Pires, Douglas E.V., Gokhale, Rajesh S., Thukral, Lipi

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