DTF: Deep Tensor Factorization for predicting anticancer drug synergy von Sun, Zexuan, Huang, Shujun, Jiang, Peiran, Hu, Pingzhao

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ST-CellSeg: Cell segmentation for imaging-based spatial transcriptomics using multi-scale manifold learning von Li, Youcheng, Lac, Leann, Liu, Qian, Hu, Pingzhao

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NNICE: a deep quantile neural network algorithm for expression deconvolution von Jin, Yong Won, Hu, Pingzhao, Liu, Qian

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A Two-Dimensional Sparse Matrix Profile DenseNet for COVID-19 Diagnosis Using Chest CT Images von Liu, Qian, Leung, Carson K., Hu, Pingzhao

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SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data von Wei, Zhi, Wang, Wei, Hu, Pingzhao, Lyon, Gholson J., Hakonarson, Hakon

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Computational Drug Repurposing for Alzheimer's Disease Using Risk Genes From GWAS and Single-Cell RNA Sequencing Studies von Xu, Yun, Kong, Jiming, Hu, Pingzhao

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Self-supervised deep learning model for COVID-19 lung CT image segmentation highlighting putative causal relationship among age, underlying disease and COVID-19 von Fung, Daryl L. X., Liu, Qian, Zammit, Judah, Leung, Carson Kai-Sang, Hu, Pingzhao

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Deep clustering of small molecules at large-scale via variational autoencoder embedding and K-means von Hadipour, Hamid, Liu, Chengyou, Davis, Rebecca, Cardona, Silvia T, Hu, Pingzhao

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Identification of significantly mutated subnetworks in the breast cancer genome von Ajwad, Rasif, Domaratzki, Michael, Liu, Qian, Feizi, Nikta, Hu, Pingzhao

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Radiogenomic association of deep MR imaging features with genomic profiles and clinical characteristics in breast cancer von Liu, Qian, Hu, Pingzhao

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A machine learning model trained on a high-throughput antibacterial screen increases the hit rate of drug discovery von Rahman, A. S. M. Zisanur, Liu, Chengyou, Sturm, Hunter, Hogan, Andrew M, Davis, Rebecca, Hu, Pingzhao, Cardona, Silvia T

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A novel integrative computational framework for breast cancer radiogenomic biomarker discovery von Liu, Qian, Hu, Pingzhao

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Association Analysis of Somatic Copy Number Alteration Burden With Breast Cancer Survival von Zhang, Linfan, Feizi, Nikta, Chi, Chen, Hu, Pingzhao

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MicroRNA-144 is a circulating effector of remote ischemic preconditioning von Li, Jing, Rohailla, Sagar, Gelber, Nitai, Rutka, James, Sabah, Nesrin, Gladstone, Rachel A., Wei, Can, Hu, Pingzhao, Kharbanda, Rajesh K., Redington, Andrew N.

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Predicting breast cancer drug response using a multiple-layer cell line drug response network model von Huang, Shujun, Hu, Pingzhao, Lakowski, Ted M.

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Conditional generative adversarial network driven radiomic prediction of mutation status based on magnetic resonance imaging of breast cancer von Huang, Zi Huai, Chen, Lianghong, Sun, Yan, Liu, Qian, Hu, Pingzhao

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Computational drug repurposing for inflammatory bowel disease using genetic information von Grenier, Liam, Hu, Pingzhao

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An OpenMP-based tool for finding longest common subsequence in bioinformatics von Shikder, Rayhan, Thulasiraman, Parimala, Irani, Pourang, Hu, Pingzhao

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ABT-MPNN: an atom-bond transformer-based message-passing neural network for molecular property prediction von Liu, Chengyou, Sun, Yan, Davis, Rebecca, Cardona, Silvia T., Hu, Pingzhao

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Prenatal exposure to maternal cigarette smoking and DNA methylation: epigenome-wide association in a discovery sample of adolescents and replication in an independent cohort at bir... von Lee, Ken W K, Richmond, Rebecca, Hu, Pingzhao, French, Leon, Shin, Jean, Bourdon, Celine, Reischl, Eva, Waldenberger, Melanie, Zeilinger, Sonja, Gaunt, Tom, McArdle, Wendy, Ring, Susan, Woodward, Geoff, Bouchard, Luigi, Gaudet, Daniel, Smith, George Davey, Relton, Caroline, Paus, Tomas, Pausova, Zdenka

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