Fragment ion intensity prediction improves the identification rate of non-tryptic peptides in timsTOF von Adams, Charlotte, Gabriel, Wassim, Laukens, Kris, Picciani, Mario, Wilhelm, Mathias, Bittremieux, Wout, Boonen, Kurt

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Rescoring Peptide Spectrum Matches: Boosting Proteomics Performance by Integrating Peptide Property Predictors Into Peptide Identification von Kalhor, Mostafa, Lapin, Joel, Picciani, Mario, Wilhelm, Mathias

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Deep Learning-Assisted Analysis of Immunopeptidomics Data von Gabriel, Wassim, Picciani, Mario, The, Matthew, Wilhelm, Mathias

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Oktoberfest: Open‐source spectral library generation and rescoring pipeline based on Prosit von Picciani, Mario, Gabriel, Wassim, Giurcoiu, Victor‐George, Shouman, Omar, Hamood, Firas, Lautenbacher, Ludwig, Jensen, Cecilia Bang, Müller, Julian, Kalhor, Mostafa, Soleymaniniya, Armin, Kuster, Bernhard, The, Matthew, Wilhelm, Mathias

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AI-Assisted Processing Pipeline to Boost Protein Isoform Detection von The, Matthew, Picciani, Mario, Jensen, Cecilia, Gabriel, Wassim, Kuster, Bernhard, Wilhelm, Mathias

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Network medicine-based epistasis detection in complex diseases: ready for quantum computing von Hoffmann, Markus, Poschenrieder, Julian M, Incudini, Massimiliano, Baier, Sylvie, Fritz, Amelie, Maier, Andreas, Hartung, Michael, Hoffmann, Christian, Trummer, Nico, Adamowicz, Klaudia, Picciani, Mario, Scheibling, Evelyn, Harl, Maximilian, Lesch, Ingmar, Frey, Hunor, Kayser, Simon, Wissenberg, Paul, Schwartz, Leon, Hafner, Leon, Acharya, Aakriti, Hackl, Lena, Grabert, Gordon, Lee, Sung-Gwon, Cho, Gyuhyeok, Cloward, Matthew E, Jankowski, Jakub, Lee, Hye Kyung, Tsoy, Olga, Wenke, Nina, Pedersen, Anders Gorm, Bonnelykke, Klaus, Mandarino, Antonio, Melograna, Federico, Schulz, Laura, Climente-Gonzalez, Hector, Wilhelm, Mathias, Iapichino, Luigi, Wienbrandt, Lars, Ellinghaus, David, Van Steen, Kristel, Grossi, Michele, Furth, Priscilla A, Hennighausen, Lothar, Di Pierro, Alessandra, Baumbach, Jan, Kacprowski, Tim, List, Markus, Blumenthal, David B

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Network medicine-based epistasis detection in complex diseases: ready for quantum computing von Hoffmann, Markus, Poschenrieder, Julian M, Incudini, Massimiliano, Baier, Sylvie, Fritz, Amelie, Maier, Andreas, Hartung, Michael, Hoffmann, Christian, Trummer, Nico, Adamowicz, Klaudia, Picciani, Mario, Scheibling, Evelyn, Harl, Maximilian V, Lesch, Ingmar, Frey, Hunor, Kayser, Simon, Wissenberg, Paul, Schwartz, Leon, Hafner, Leon, Acharya, Aakriti, Hackl, Lena, Grabert, Gordon, Lee, Sung-Gwon, Cho, Gyuhyeok, Cloward, Matthew E, Jankowski, Jakub, Lee, Hye Kyung, Tsoy, Olga, Wenke, Nina, Pedersen, Anders Gorm, Bønnelykke, Klaus, Mandarino, Antonio, Melograna, Federico, Schulz, Laura, Climente-González, Héctor, Wilhelm, Mathias, Iapichino, Luigi, Wienbrandt, Lars, Ellinghaus, David, Van Steen, Kristel, Grossi, Michele, Furth, Priscilla A, Hennighausen, Lothar, Di Pierro, Alessandra, Baumbach, Jan, Kacprowski, Tim, List, Markus, Blumenthal, David B

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Peptidomics: Methods and Strategies von Schrader, Michael, Fricker, Lloyd

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Oktoberfest Workshop Dataset von Picciani, Mario

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P06-040-23 The Proteomes That Feed the World von Piller, Andrea, Brajkovic, Sarah, Abbas, Qussai, Andrade-Galan, Paula, Aydin, Ezgi, Corongiu, Gianluca, Giordano, Guido, Haljiti, Genc, Hein, Sophia, Pan, Jiuyue, Picciani, Mario, Röhrl, Patrick, Ramirez, Veronica, Saylan, Cemil Can, Soleymaniniya, Armin, Urzinger, Sebastian, Würstl, Lukas, Avramova, Viktoriya, Dawid, Corinna, Frishman, Dimitrij, Gutjahr, Caroline, Hückelhoven, Ralph, Ludwig, Christina, Pauling, Josch, Schön, Chris-Carolin, Schwechheimer, Claus, Wilhelm, Mathias, Wilhelm, Stephanie, Poppenberger, Brigitte, Kuster, Bernhard

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Datasets for Oktoberfest: Open-source spectral library generation and rescoring pipeline based on Prosit von Picciani, Mario

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The Proteomes that Feed the World von Piller, Andrea, Brajkovic, Sarah, Abbas, Qussai, Andrade‐Galan, Paula, Aydin, Ezgi, Corongiu, Gianluca, Giordano, Guido, Haljiti, Genc, Hein, Sophia, Pan, Jiuyue, Picciani, Mario, Ramirez, Veronica, Röhrl, Patrick, Saylan, Cemil Can, Soleymaniniya, Armin, Urzinger, Sebastian, Würstl, Lukas, Avramova, Viktoriya, Dawid, Corinna, Frishman, Dmitrij, Gutjahr, Caroline, Hückelhoven, Ralph, Ludwig, Christina, Pauling, Josch, Schön, Chris‐Carolin, Schwechheimer, Claus, Wilhelm, Mathias, Wilhelm, Stephanie, Poppenberger, Brigitte, Küster, Bernhard

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Sample output from from Oktoberfest von Gabriel, Wassim, Picciani, Mario, The, Matthew, Wilhelm, Mathias

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Input data for oktoberfest von Gabriel, Wassim, Picciani, Mario, The, Matthew, Wilhelm, Mathias

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Network medicine-based epistasis detection in complex diseases: ready for quantum computing von Hoffmann, Markus, Poschenrieder, Julian M, Incudini, Massimiliano, Baier, Sylvie, Fitz, Amelie, Maier, Andreas, Hartung, Michael, Hoffmann, Christian, Trummer, Nico, Adamowicz, Klaudia, Picciani, Mario, Scheibling, Evelyn, Harl, Maximilian V, Lesch, Ingmar, Frey, Hunor, Kayser, Simon, Wissenberg, Paul, Schwartz, Leon, Hafner, Leon, Acharya, Aakriti, Hackl, Lena, Grabert, Gordon, Lee, Sung-Gwon, Cho, Gyuhyeok, Cloward, Matthew, Jankowski, Jakub, Lee, Hye Kyung, Tsoy, Olga, Wenke, Nina, Pedersen, Anders Gorm, Bønnelykke, Klaus, Mandarino, Antonio, Melograna, Federico, Schulz, Laura, Climente-González, Héctor, Wilhelm, Mathias, Iapichino, Luigi, Wienbrandt, Lars, Ellinghaus, David, Van Steen, Kristel, Grossi, Michele, Furth, Priscilla A, Hennighausen, Lothar, Di Pierro, Alessandra, Baumbach, Jan, Kacprowski, Tim, List, Markus, Blumenthal, David B

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