Identifying changes in viral fitness using population genetic structure von Petros, Brittany A

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Model-directed generation of artificial CRISPR-Cas13a guide RNA sequences improves nucleic acid detection von Mantena, Sreekar, Pillai, Priya P, Petros, Brittany A, Welch, Nicole L, Myhrvold, Cameron, Sabeti, Pardis C, Metsky, Hayden C

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Viral Lineages in the 2022 RSV Surge in the United States von Adams, Gordon, Moreno, Gage K., Petros, Brittany A., Uddin, Rockib, Levine, Zoe, Kotzen, Ben, Messer, Katelyn S., Dobbins, Sabrina T., DeRuff, Katherine C., Loreth, Christine M., Brock-Fisher, Taylor, Schaffner, Stephen F., Chaluvadi, Sushma, Kanjilal, Sanjat, Luban, Jeremy, Ozonoff, Al, Park, Daniel J., Turbett, Sarah E., Siddle, Katherine J., MacInnis, Bronwyn L., Sabeti, Pardis C., Lemieux, Jacob E.

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Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2 von Arizti-Sanz, Jon, Freije, Catherine A., Stanton, Alexandra C., Petros, Brittany A., Boehm, Chloe K., Siddiqui, Sameed, Shaw, Bennett M., Adams, Gordon, Kosoko-Thoroddsen, Tinna-Solveig F., Kemball, Molly E., Uwanibe, Jessica N., Ajogbasile, Fehintola V., Eromon, Philomena E., Gross, Robin, Wronka, Loni, Caviness, Katie, Hensley, Lisa E., Bergman, Nicholas H., MacInnis, Bronwyn L., Happi, Christian T., Lemieux, Jacob E., Sabeti, Pardis C., Myhrvold, Cameron

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Early Introduction and Rise of the Omicron Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variant in Highly Vaccinated University Populations von Petros, Brittany A, Turcinovic, Jacquelyn, Welch, Nicole L, White, Laura F, Kolaczyk, Eric D, Bauer, Matthew R, Cleary, Michael, Dobbins, Sabrina T, Doucette-Stamm, Lynn, Gore, Mitch, Nair, Parvathy, Nguyen, Tien G, Rose, Scott, Taylor, Bradford P, Tsang, Daniel, Wendlandt, Erik, Hope, Michele, Platt, Judy T, Jacobson, Karen R, Bouton, Tara, Yune, Seyho, Auclair, Jared R, Landaverde, Lena, Klapperich, Catherine M, Hamer, Davidson H, Hanage, William P, MacInnis, Bronwyn L, Sabeti, Pardis C, Connor, John H, Springer, Michael

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Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants von Welch, Nicole L., Zhu, Meilin, Hua, Catherine, Weller, Juliane, Mirhashemi, Marzieh Ezzaty, Nguyen, Tien G., Mantena, Sreekar, Bauer, Matthew R., Shaw, Bennett M., Ackerman, Cheri M., Thakku, Sri Gowtham, Tse, Megan W., Kehe, Jared, Uwera, Marie-Martine, Eversley, Jacqueline S., Bielwaski, Derek A., McGrath, Graham, Braidt, Joseph, Johnson, Jeremy, Cerrato, Felecia, Moreno, Gage K., Krasilnikova, Lydia A., Petros, Brittany A., Gionet, Gabrielle L., King, Ewa, Huard, Richard C., Jalbert, Samantha K., Cleary, Michael L., Fitzgerald, Nicholas A., Gabriel, Stacey B., Gallagher, Glen R., Smole, Sandra C., Madoff, Lawrence C., Brown, Catherine M., Keller, Matthew W., Wilson, Malania M., Kirby, Marie K., Barnes, John R., Park, Daniel J., Siddle, Katherine J., Happi, Christian T., Hung, Deborah T., Springer, Michael, MacInnis, Bronwyn L., Lemieux, Jacob E., Rosenberg, Eric, Branda, John A., Blainey, Paul C., Sabeti, Pardis C., Myhrvold, Cameron

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Optimisation and evaluation of viral genomic sequencing of SARS-CoV-2 rapid diagnostic tests: a laboratory and cohort-based study von Paull, Jillian S, Petros, Brittany A, Brock-Fisher, Taylor M, Jalbert, Samantha A, Selser, Victoria M, Messer, Katelyn S, Dobbins, Sabrina T, DeRuff, Katherine C, Deng, Davy, Springer, Michael, Sabeti, Pardis C

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Severe Acute Respiratory Syndrome Coronavirus 2 Household Transmission During the Omicron Era in Massachusetts: A Prospective, Case-Ascertained Study Using Genomic Epidemiology von Banga, Jaspreet, Brock-Fisher, Taylor, Petros, Brittany A, Dai, Eric Y, Leonelli, Ariana T, Dobbins, Sabrina T, Messer, Katelyn S, Nathanson, Audrey B, Capone, Amelia, Littlehale, Nancy, Appiah-Danquah, Viola, Dim, Siang, Moreno, Gage K, Crowther, Maura, DeRuff, Katherine C, MacInnis, Bronwyn L, Springer, Michael, Sabeti, Pardis C, Stephenson, Kathryn E

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Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from Nigeria von Oguzie, Judith U., Petros, Brittany A., Oluniyi, Paul E., Mehta, Samar B., Eromon, Philomena E., Nair, Parvathy, Adewale-Fasoro, Opeoluwa, Ifoga, Peace Damilola, Odia, Ikponmwosa, Pastusiak, Andrzej, Gbemisola, Otitoola Shobi, Aiyepada, John Oke, Uyigue, Eghosasere Anthonia, Edamhande, Akhilomen Patience, Blessing, Osiemi, Airende, Michael, Tomkins-Tinch, Christopher, Qu, James, Stenson, Liam, Schaffner, Stephen F., Oyejide, Nicholas, Ajayi, Nnenna A., Ojide, Kingsley, Ogah, Onwe, Abejegah, Chukwuyem, Adedosu, Nelson, Ayodeji, Oluwafemi, Liasu, Ahmed A., Okogbenin, Sylvanus, Okokhere, Peter O., Park, Daniel J., Folarin, Onikepe A., Komolafe, Isaac, Ihekweazu, Chikwe, Frost, Simon D. W., Jackson, Ethan K., Siddle, Katherine J., Sabeti, Pardis C., Happi, Christian T.

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Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework von Petros, Brittany A., Paull, Jillian S., Tomkins-Tinch, Christopher H., Loftness, Bryn C., DeRuff, Katherine C., Nair, Parvathy, Gionet, Gabrielle L., Benz, Aaron, Brock-Fisher, Taylor, Hughes, Michael, Yurkovetskiy, Leonid, Mulaudzi, Shandukani, Leenerman, Emma, Nyalile, Thomas, Moreno, Gage K., Specht, Ivan, Sani, Kian, Adams, Gordon, Babet, Simone V., Baron, Emily, Blank, Jesse T., Boehm, Chloe, Botti-Lodovico, Yolanda, Brown, Jeremy, Buisker, Adam R., Burcham, Timothy, Chylek, Lily, Cronan, Paul, Dauphin, Ann, Desreumaux, Valentine, Doss, Megan, Flynn, Belinda, Gladden-Young, Adrianne, Glennon, Olivia, Harmon, Hunter D., Hook, Thomas V., Kary, Anton, King, Clay, Loreth, Christine, Marrs, Libby, McQuade, Kyle J., Milton, Thorsen T., Mulford, Jada M., Oba, Kyle, Pearlman, Leah, Schifferli, Mark, Schmidt, Madelyn J., Tandus, Grace M., Tyler, Andy, Vodzak, Megan E., Krohn Bevill, Kelly, Colubri, Andres, MacInnis, Bronwyn L., Ozsoy, A. Zeynep, Parrie, Eric, Sholtes, Kari, Siddle, Katherine J., Fry, Ben, Luban, Jeremy, Park, Daniel J., Marshall, John, Bronson, Amy, Schaffner, Stephen F., Sabeti, Pardis C.

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Author Correction: Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants von Welch, Nicole L., Zhu, Meilin, Hua, Catherine, Weller, Juliane, Mirhashemi, Marzieh Ezzaty, Nguyen, Tien G., Mantena, Sreekar, Bauer, Matthew R., Shaw, Bennett M., Ackerman, Cheri M., Thakku, Sri Gowtham, Tse, Megan W., Kehe, Jared, Uwera, Marie-Martine, Eversley, Jacqueline S., Bielwaski, Derek A., McGrath, Graham, Braidt, Joseph, Johnson, Jeremy, Cerrato, Felecia, Moreno, Gage K., Krasilnikova, Lydia A., Petros, Brittany A., Gionet, Gabrielle L., King, Ewa, Huard, Richard C., Jalbert, Samantha K., Cleary, Michael L., Fitzgerald, Nicholas A., Gabriel, Stacey B., Gallagher, Glen R., Smole, Sandra C., Madoff, Lawrence C., Brown, Catherine M., Keller, Matthew W., Wilson, Malania M., Kirby, Marie K., Barnes, John R., Park, Daniel J., Siddle, Katherine J., Happi, Christian T., Hung, Deborah T., Springer, Michael, MacInnis, Bronwyn L., Lemieux, Jacob E., Rosenberg, Eric, Branda, John A., Blainey, Paul C., Sabeti, Pardis C., Myhrvold, Cameron

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The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response von Botti-Lodovico, Yolanda, Nair, Parvathy, Nosamiefan, Dolo, Stremlau, Matthew, Schaffner, Stephen, Agignoae, Sebastian V., Aiyepada, John Oke, Ajogbasile, Fehintola V., Akpede, George O., Alhasan, Foday, Andersen, Kristian G., Asogun, Danny A., Ayodeji, Oladele Oluwafemi, Badiane, Aida S., Barnes, Kayla, Bauer, Matthew R., Bell-Kareem, Antoinette, Benard, Muoebonam Ekene, Benevolence, Ebo Ohomoime, Blessing, Osiemi, Boehm, Chloe K., Boisen, Matthew L., Bond, Nell G., Branco, Luis M., Butts, Michael J., Carter, Amber, Colubri, Andres, Deme, Awa B., DeRuff, Katherine C., Diedhiou, Younousse, Edamhande, Akhilomen Patience, Elhamoumi, Siham, Engel, Emily J., Eromon, Philomena, Fallah, Mosoka, Folarin, Onikepe A., Fry, Ben, Garry, Robert, Gaye, Amy, Gbakie, Michael, Gevao, Sahr M., Gionet, Gabrielle, Gladden-Young, Adrianne, Goba, Augustine, Gomis, Jules Francois, Happi, Anise N., Houghton, Mary, Ihekwuazu, Chikwe, Iruolagbe, Christopher Ojemiega, Jackson, Jonathan, Jalloh, Simbirie, Johnson, Jeremy, Kanneh, Lansana, Kayode, Adeyemi, Kemball, Molly, Kingsley, Ojide Chiedozie, Koroma, Veronica, Kotliar, Dylan, Mehta, Samar, Metsky, Hayden C., Michael, Airende, Mirhashemi, Marzieh Ezzaty, Modjarrad, Kayvon, Momoh, Mambu, Myhrvold, Cameron A., Naregose, Okonofua Grace, Ndiaye, Tolla, Ndiaye, Mouhamadou, Ndiaye, Aliou, Normandin, Erica, Odia, Ikponmwosa, Oguzie, Judith Uche, Okogbenin, Sylvanus A., Okokhere, Peter O., Okolie, Johnson, Olawoye, Idowu B., Olumade, Testimony J., Oluniyi, Paul E., Omoregie, Omigie, Park, Daniel J., Paye, Marietou Faye, Petros, Brittany, Philippakis, Anthony A., Priscilla, Abechi, Ricks, Alan, Rimoin, Anne, Sandi, John Demby, Schieffelin, John S., Schreiber, Monica, Seck, Mame Cheikh, Siddiqui, Sameed, Siddle, Katherine, Smither, Allison R., Sy, Mouhamad, Sy, Ngayo, Tomkins-Tinch, Christopher H., Tomori, Oyewale, Ugwu, Chinedu, Uwanibe, Jessica N., Uyigue, Eghosasere Anthonia

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Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework Petros et al von Brittany Petros

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Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework Petros et al von Brittany Petros

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CRISPR EFFECTOR SYSTEM BASED DIAGNOSTICS FOR VIRUS DETECTION von Sabeti, Pardis, Petros, Brittany, Arizti Sanz, Jon, Myhrvold, Cameron, Stanton, Alexandra

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CRISPR EFFECTOR SYSTEM BASED DIAGNOSTICS FOR VIRUS DETECTION von MYHRVOLD, Cameron, STANTON, Alexandra, ARIZTI SANZ, Jon, SABETI, Pardis, PETROS, Brittany

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Tumor antigen-independent and cell size variation-inclusive enrichment of viable circulating tumor cells von Zhao, Wujun, Liu, Yang, Jenkins, Brittany D, Cheng, Rui, Harris, Bryana N, Zhang, Weizhong, Xie, Jin, Murrow, Jonathan R, Hodgson, Jamie, Egan, Mary, Bankey, Ana, Nikolinakos, Petros G, Ali, Haythem Y, Meichner, Kristina, Newman, Lisa A, Davis, Melissa B, Mao, Leidong

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Investigation of triple-negative breast cancer risk alleles in an International African-enriched cohort von Martini, Rachel, Chen, Yalei, Jenkins, Brittany D., Elhussin, Isra A., Cheng, Esther, Hoda, Syed A., Ginter, Paula S., Hanover, Jeffrey, Zeidan, Rozina B., Oppong, Joseph K., Adjei, Ernest K., Jibril, Aisha, Chitale, Dhananjay, Bensenhaver, Jessica M., Awuah, Baffour, Bekele, Mahteme, Abebe, Engida, Kyei, Ishmael, Aitpillah, Frances S., Adinku, Michael O., Ankomah, Kwasi, Osei-Bonsu, Ernest B., Nathansan, Saul David, Jackson, LaToya, Jiagge, Evelyn, Petersen, Lindsay F., Proctor, Erica, Nikolinakos, Petros, Gyan, Kofi K., Yates, Clayton, Kittles, Rick, Newman, Lisa A., Davis, Melissa B.

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Treatment Outcomes in Global Systematic Review and Patient Meta-Analysis of Children with Extensively Drug-Resistant Tuberculosis von Osman, Muhammad, Harausz, Elizabeth P, Garcia-Prats, Anthony J, Schaaf, H Simon, Moore, Brittany K, Hicks, Robert M, Achar, Jay, Amanullah, Farhana, Barry, Pennan, Becerra, Mercedes, Chiotan, Domnica I, Drobac, Peter C, Flood, Jennifer, Furin, Jennifer, Gegia, Medea, Isaakidis, Petros, Mariandyshev, Andrei, Ozere, Iveta, Shah, N Sarita, Skrahina, Alena, Yablokova, Elena, Seddon, James A, Hesseling, Anneke C

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Atypical Chemokine Receptor 1 ( DARC/ACKR1 ) in Breast Tumors Is Associated with Survival, Circulating Chemokines, Tumor-Infiltrating Immune Cells, and African Ancestry von Jenkins, Brittany D, Martini, Rachel N, Hire, Rupali, Brown, Andrea, Bennett, Briana, Brown, I'nasia, Howerth, Elizabeth W, Egan, Mary, Hodgson, Jamie, Yates, Clayton, Kittles, Rick, Chitale, Dhananjay, Ali, Haythem, Nathanson, David, Nikolinakos, Petros, Newman, Lisa, Monteil, Michele, Davis, Melissa B

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