Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis von Peterson, Eliza J.R., Abidi, Abrar A., Arrieta-Ortiz, Mario L., Aguilar, Boris, Yurkovich, James T., Kaur, Amardeep, Pan, Min, Srinivas, Vivek, Shmulevich, Ilya, Baliga, Nitin S.

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MtrA modulates Mycobacterium tuberculosis cell division in host microenvironments to mediate intrinsic resistance and drug tolerance von Peterson, Eliza J.R., Brooks, Aaron N., Reiss, David J., Kaur, Amardeep, Do, Julie, Pan, Min, Wu, Wei-Ju, Morrison, Robert, Srinivas, Vivek, Carter, Warren, Arrieta-Ortiz, Mario L., Ruiz, Rene A., Bhatt, Apoorva, Baliga, Nitin S.

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A high-resolution network model for global gene regulation in Mycobacterium tuberculosis von Peterson, Eliza J R, Reiss, David J, Turkarslan, Serdar, Minch, Kyle J, Rustad, Tige, Plaisier, Christopher L, Longabaugh, William J R, Sherman, David R, Baliga, Nitin S

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Transcriptional portrait of M. bovis BCG during biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment von Flores-Valdez, Mario Alberto, Aceves-Sánchez, Michel de Jesús, Peterson, Eliza J. R., Baliga, Nitin, Bravo-Madrigal, Jorge, De la Cruz-Villegas, Miguel Ángel, Ares, Miguel A., Born, Sarah, Voskuil, Martin, Pérez-Padilla, Nayeli Areli, Burciaga-Flores, Mirna, Camacho-Villegas, Tanya Amanda, Espinoza-Jorge, María Guadalupe

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Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis von Peterson, Eliza J.R., Abidi, Abrar A., Arrieta-Ortiz, Mario L., Aguilar, Boris, Yurkovich, James T., Kaur, Amardeep, Pan, Min, Srinivas, Vivek, Shmulevich, Ilya, Baliga, Nitin S.

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Mathematical models to study the biology of pathogens and the infectious diseases they cause von Xavier, Joao B., Monk, Jonathan M., Poudel, Saugat, Norsigian, Charles J., Sastry, Anand V., Liao, Chen, Bento, Jose, Suchard, Marc A., Arrieta-Ortiz, Mario L., Peterson, Eliza J.R., Baliga, Nitin S., Stoeger, Thomas, Ruffin, Felicia, Richardson, Reese A.K., Gao, Catherine A., Horvath, Thomas D., Haag, Anthony M., Wu, Qinglong, Savidge, Tor, Yeaman, Michael R.

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The DNA-binding network of Mycobacterium tuberculosis von Minch, Kyle J., Rustad, Tige R., Peterson, Eliza J. R., Winkler, Jessica, Reiss, David J., Ma, Shuyi, Hickey, Mark, Brabant, William, Morrison, Bob, Turkarslan, Serdar, Mawhinney, Chris, Galagan, James E., Price, Nathan D., Baliga, Nitin S., Sherman, David R.

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MadR mediates acyl CoA-dependent regulation of mycolic acid desaturation in mycobacteria von Cooper, Charlotte, Peterson, Eliza J. R., Bailo, Rebeca, Pan, Min, Singh, Albel, Moynihan, Patrick, Nakaya, Makoto, Fujiwara, Nagatoshi, Baliga, Nitin, Bhatt, Apoorva

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Path‐seq identifies an essential mycolate remodeling program for mycobacterial host adaptation von Peterson, Eliza JR, Bailo, Rebeca, Rothchild, Alissa C, Arrieta‐Ortiz, Mario L, Kaur, Amardeep, Pan, Min, Mai, Dat, Abidi, Abrar A, Cooper, Charlotte, Aderem, Alan, Bhatt, Apoorva, Baliga, Nitin S

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Comparison of the transcriptome, lipidome, and c-di-GMP production between BCGΔBCG1419c and BCG, with Mincle- and Myd88-dependent induction of proinflammatory cytokines in murine m... von Flores-Valdez, Mario Alberto, Peterson, Eliza J. R., Aceves-Sánchez, Michel de Jesús, Baliga, Nitin S., Morita, Yasu S., Sparks, Ian L., Saini, Deepak Kumar, Yadav, Rahul, Lang, Roland, Mata-Espinosa, Dulce, León-Contreras, Juan Carlos, Hernández-Pando, Rogelio

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A non-canonical role of caspase-1 in regulating bacterial physiology and antimicrobial resistance von Akhade, Ajay Suresh, Mosquera, Gabriela Verdezoto, Arrieta-Ortiz, Mario L, Kaur, Amardeep, Peterson, Eliza J.R, Baliga, Nitin S, Hughes, Kelly T, Subramanian, Naeha

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The BCGΔBCG1419c Vaccine Candidate Reduces Lung Pathology, IL-6, TNF-α, and IL-10 During Chronic TB Infection von Flores-Valdez, Mario A, Pedroza-Roldán, César, Aceves-Sánchez, Michel de Jesús, Peterson, Eliza J R, Baliga, Nitin S, Hernández-Pando, Rogelio, Troudt, JoLynn, Creissen, Elizabeth, Izzo, Linda, Bielefeldt-Ohmann, Helle, Bickett, Thomas, Izzo, Angelo A

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Transcriptome signature of cell viability predicts drug response and drug interaction in Mycobacterium tuberculosis von Srinivas, Vivek, Ruiz, Rene A., Pan, Min, Immanuel, Selva Rupa Christinal, Peterson, Eliza J.R., Baliga, Nitin S.

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PerSort Facilitates Characterization and Elimination of Persister Subpopulation in Mycobacteria von Srinivas, Vivek, Arrieta-Ortiz, Mario L, Kaur, Amardeep, Peterson, Eliza J R, Baliga, Nitin S

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A comprehensive map of genome-wide gene regulation in Mycobacterium tuberculosis von Turkarslan, Serdar, Peterson, Eliza J R, Rustad, Tige R, Minch, Kyle J, Reiss, David J, Morrison, Robert, Ma, Shuyi, Price, Nathan D, Sherman, David R, Baliga, Nitin S

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Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks using PRIME von Immanuel, Selva Rupa Christinal, Arrieta-Ortiz, Mario L., Ruiz, Rene A., Pan, Min, Lopez Garcia de Lomana, Adrian, Peterson, Eliza J. R., Baliga, Nitin S.

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High-throughput screening for RecA inhibitors using a transcreener adenosine 5'-O-diphosphate assay von Peterson, Eliza J R, Janzen, William P, Kireev, Dmitri, Singleton, Scott F

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Inhibitors of Streptococcus pneumoniae Surface Endonuclease EndA Discovered by High-Throughput Screening Using a PicoGreen Fluorescence Assay von Peterson, Eliza J.R., Kireev, Dmitri, Moon, Andrea F., Midon, Marika, Janzen, William P., Pingoud, Alfred, Pedersen, Lars C., Singleton, Scott F.

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