Soft sweeps and beyond: understanding the patterns and probabilities of selection footprints under rapid adaptation von Hermisson, Joachim, Pennings, Pleuni S., Kelley, Joanna

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Polygenic adaptation: From sweeps to subtle frequency shifts von Höllinger, Ilse, Pennings, Pleuni S, Hermisson, Joachim

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Soft sweeps III: the signature of positive selection from recurrent mutation von Pennings, Pleuni S, Hermisson, Joachim

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Loss and recovery of genetic diversity in adapting populations of HIV von Pennings, Pleuni S, Kryazhimskiy, Sergey, Wakeley, John

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HIV drug resistance: problems and perspectives von Pennings, Pleuni S.

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Ten simple rules for designing and running a computing minor for bio/chem students von Reyes, Rochelle-Jan, Hosmane, Nina, Ihorn, Shasta, Johnson, Milo, Kulkarni, Anagha, Nelson, Jennifer, Savvides, Michael, Ta, Duc, Yoon, Ilmi, Pennings, Pleuni S

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Soft sweeps II--molecular population genetics of adaptation from recurrent mutation or migration von Pennings, Pleuni S, Hermisson, Joachim

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The clarifying role of time series data in the population genetics of HIV von Feder, Alison F., Pennings, Pleuni S., Petrov, Dmitri A.

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Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance von Moreno-Gamez, Stefany, Hill, Alison L., Rosenbloom, Daniel I. S., Petrov, Dmitri A., Nowak, Martin A., Pennings, Pleuni S.

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Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV von Theys, Kristof, Feder, Alison F, Gelbart, Maoz, Hartl, Marion, Stern, Adi, Pennings, Pleuni S

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Soft Sweeps: Molecular Population Genetics of Adaptation From Standing Genetic Variation von Hermisson, Joachim, Pennings, Pleuni S

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Drivers of within-host genetic diversity in acute infections of viruses von Gelbart, Maoz, Harari, Sheri, Ben-Ari, Ya'ara, Kustin, Talia, Wolf, Dana, Mandelboim, Michal, Mor, Orna, Pennings, Pleuni S., Stern, Adi

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Understanding patterns of HIV multi-drug resistance through models of temporal and spatial drug heterogeneity von Feder, Alison F., Harper, Kristin N., Brumme, Chanson J., Pennings, Pleuni S.

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Effects of physical activity interventions using wearables to improve objectively-measured and patient-reported outcomes in adults following orthopaedic surgical procedures: A syst... von Master, Hiral, Bley, Jordan A, Coronado, Rogelio A, Robinette, Payton E, White, Daniel K, Pennings, Jacquelyn S, Archer, Kristin R

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Large grazers suppress a foundational plant and reduce soil carbon concentration in eastern US saltmarshes von Sharp, S. J., Davidson, K. E., Angelini, C., Fischman, H. S., Pennings, S., Fowler, M. S., Griffin, J. N.

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How the waxing and waning of a mutation determines HIV treatment success von Pennings, Pleuni S

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Mighty Men: A Pilot Test of the Feasibility and Acceptability of a Faith-Based, Individually Tailored, Cluster-Randomized Weight Loss Trial for Middle-Aged and Older African Americ... von Griffith, Derek M., Pennings, Jacquelyn S., Jaeger, Emily C.

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An Analytically Tractable Model for Competitive Speciation von Pennings, Pleuni S., Kopp, Michael, Meszéna, Géza, Dieckmann, Ulf, Hermisson, Joachim

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Evidence for sweep signatures in antibiotic-resistant strains in three species of bacteria von Pradhananga, Anjani, Benitez-Rivera, Lorena, Clark, Candace, Tisthammer, Kaho H, Pennings, Pleuni S

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Clinical and Cost-Effectiveness of Lumbar Interbody Fusion Using Tritanium Posterolateral Cage (vs. Propensity-Matched Cohort of PEEK Cage) von Khan, Inamullah, Parker, Scott L., Bow, Hansen, Sivaganesan, Ahilan, Pennings, Jacquelyn S., Stephens, Byron F., Steinle, Anthony M., Gupta, Rishabh, Devin, Clinton J.

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