Folding in lipid membranes (FILM): A novel method for the prediction of small membrane protein 3D structures von Pellegrini-Calace, M., Carotti, A., Jones, D. T.

Volltext

Detecting DNA-binding helix–turn–helix structural motifs using sequence and structure information von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext

Extending CATH: increasing coverage of the protein structure universe and linking structure with function von Cuff, Alison L, Sillitoe, Ian, Lewis, Tony, Clegg, Andrew B, Rentzsch, Robert, Furnham, Nicholas, Pellegrini-Calace, Marialuisa, Jones, David, Thornton, Janet, Orengo, Christine A

Volltext

Neuronal nicotinic receptor agonists: a multi-approach development of the pharmacophore von Nicolotti, O, Pellegrini-Calace, M, Carrieri, A, Altomare, C, Centeno, N B, Sanz, F, Carotti, A

Volltext

Towards genome-scale structure prediction for transmembrane proteins von Hurwitz, Naama, Pellegrini-Calace, Marialuisa, Jones, David T

Volltext

Identification of a novel putative mitogen-activated kinase cascade on human chromosome 21 by computational approaches von Pellegrini-Calace, Marialuisa, Tramontano, Anna

Volltext

Comparative molecular field analysis (CoMFA) and docking studies of non-nucleoside HIV-1 RT inhibitors (NNIs) von Barreca, M.L., Carotti, A., Carrieri, A., Chimirri, A., Monforte, A.M., Pellegrini Calace, M., Rao, A.

Volltext

Erratum to `Neuronal nicotinic receptor agonists: a multi-approach development of the pharmacophore' [J. Comput. Aid. Mol. Des., Vol. 15 (2001) 859] von Nicolotti, O, Pellegrini-calace, M, Carrieri, A, Altomare, C, Centeno, Nb, Sanz, F, Carotti, A

Volltext

PoreWalker: a novel tool for the identification and characterization of channels in transmembrane proteins from their three-dimensional structure von Pellegrini-Calace, Marialuisa, Maiwald, Tim, Thornton, Janet M

Volltext

Electrostatics of aquaporin and aquaglyceroporin channels correlates with their transport selectivity von Oliva, Romina, Calamita, Giuseppe, Thornton, Janet M, Pellegrini-Calace, Marialuisa

Volltext

PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins von Oliva, Romina, Thornton, Janet M., Pellegrini-Calace, Marialuisa

Volltext

PoreWalker: A Novel Tool for the Identification and Characterization of Channels in Transmembrane Proteins from Their Three-Dimensional Structure: e1000440 von Pellegrini-Calace, Marialuisa, Maiwald, Tim, Thornton, Janet M

Volltext

Structures of DNA-binding domains of the 14 representative structures in von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

Definition of FD and PD multiple alignments: DNA-binding domains of proteins 1JHG and 1LMB from are shown von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

Number of hits detected by the 14 HMMs derived from FD multiple alignments at different entropy values von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

() Jackknife results for the PD- and FD- libraries: yellow squares indicate hits detected from the PD- library, blue squares indicate hits detected from the FD- library and green s... von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

() PD-/3D results for the nr-PDB dataset von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

Flowchart of methods von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen

RMSD/log (-value) plots for the FD-/3D () and PD-/3D () methods von Pellegrini-Calace, Marialuisa, Thornton, Janet M.

Volltext bestellen