Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer von Prat, Aleix, Parker, Joel S, Karginova, Olga, Fan, Cheng, Livasy, Chad, Herschkowitz, Jason I, He, Xiaping, Perou, Charles M

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Intrinsic subtypes of high-grade bladder cancer reflect the hallmarks of breast cancer biology von Damrauer, Jeffrey S., Hoadley, Katherine A., Chism, David D., Fan, Cheng, Tiganelli, Christopher J., Wobker, Sara E., Yeh, Jen Jen, Milowsky, Matthew I., Iyer, Gopa, Parker, Joel S., Kim, William Y.

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Immune-Related Gene Expression Profiling After PD-1 Blockade in Non-Small Cell Lung Carcinoma, Head and Neck Squamous Cell Carcinoma, and Melanoma von Prat, Aleix, Navarro, Alejandro, Paré, Laia, Reguart, Noemí, Galván, Patricia, Pascual, Tomás, Martínez, Alex, Nuciforo, Paolo, Comerma, Laura, Alos, Llucia, Pardo, Nuria, Cedrés, Susana, Fan, Cheng, Parker, Joel S, Gaba, Lydia, Victoria, Iván, Viñolas, Nuria, Vivancos, Ana, Arance, Ana, Felip, Enriqueta

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Prognostic Significance of Progesterone Receptor–Positive Tumor Cells Within Immunohistochemically Defined Luminal A Breast Cancer von PRAT, Aleix, CHEANG, Maggie Chon U, PEROU, Charles M, MARTIN, Miguel, PARKER, Joel S, CARRASCO, Eva, CABALLERO, Rosalia, TYLDESLEY, Scott, GELMON, Karen, BERNARD, Philip S, NIELSEN, Torsten O

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Genomic analysis of oesophageal squamous-cell carcinoma identifies alcohol drinking-related mutation signature and genomic alterations von Chang, Jiang, Tan, Wenle, Ling, Zhiqiang, Xi, Ruibin, Shao, Mingming, Chen, Mengjie, Luo, Yingying, Zhao, Yanjie, Liu, Yun, Huang, Xiancong, Xia, Yuchao, Hu, Jinlin, Parker, Joel S., Marron, David, Cui, Qionghua, Peng, Linna, Chu, Jiahui, Li, Hongmin, Du, Zhongli, Han, Yaling, Tan, Wen, Liu, Zhihua, Zhan, Qimin, Li, Yun, Mao, Weimin, Wu, Chen, Lin, Dongxin

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Genetic determinants of cellular addiction to DNA polymerase theta von Feng, Wanjuan, Simpson, Dennis A., Carvajal-Garcia, Juan, Price, Brandon A., Kumar, Rashmi J., Mose, Lisle E., Wood, Richard D., Rashid, Naim, Purvis, Jeremy E., Parker, Joel S., Ramsden, Dale A., Gupta, Gaorav P.

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Radiation-related genomic profile of papillary thyroid carcinoma after the Chernobyl accident von Morton, Lindsay M., Karyadi, Danielle M., Stewart, Chip, Bogdanova, Tetiana, Dawson, Eric T., Steinberg, Mia K., Dai, Jieqiong, Hartley, Stephen W., Schonfeld, Sara J., Sampson, Joshua N., Maruvka, Yosef E., Kapoor, Vidushi, Ramsden, Dale A., Carvajal-Garcia, Juan, Perou, Charles M., Parker, Joel S., Krznaric, Marko, Yeager, Meredith, Boland, Joseph F., Hutchinson, Amy, Hicks, Belynda D., Dagnall, Casey L., Gastier-Foster, Julie M., Bowen, Jay, Lee, Olivia, Machiela, Mitchell J., Cahoon, Elizabeth K., Brenner, Alina, Mabuchi, Kiyohiko, Drozdovitch, Vladimir, Masiuk, Sergii, Chepurny, Mykola, Zurnadzhy, Liudmyla Yu, Hatch, Maureen, de Gonzalez, Amy Berrington, Thomas, Gerry A., Tronko, Mykola D., Getz, Gad, Chanock, Stephen J.

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Inhibition of Lapatinib-induced Kinome Reprogramming in ERBB2-positive Breast Cancer by Targeting BET Family Bromodomains von Stuhlmiller, Timothy J., Miller, Samantha M., Zawistowski, Jon S., Nakamura, Kazuhiro, Beltran, Adriana S., Duncan, James S., Angus, Steven P., Collins, Kyla A.L, Granger, Deborah A., Reuther, Rachel A., Graves, Lee M., Gomez, Shawn M., Kuan, Pei-Fen, Parker, Joel S., Chen, Xin, Sciaky, Noah, Carey, Lisa A., Earp, H. Shelton, Jin, Jian, Johnson, Gary L.

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Topoisomerases facilitate transcription of long genes linked to autism von King, Ian F., Yandava, Chandri N., Mabb, Angela M., Hsiao, Jack S., Huang, Hsien-Sung, Pearson, Brandon L., Calabrese, J. Mauro, Starmer, Joshua, Parker, Joel S., Magnuson, Terry, Chamberlain, Stormy J., Philpot, Benjamin D., Zylka, Mark J.

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Targeting brain lesions of non-small cell lung cancer by enhancing CCL2-mediated CAR-T cell migration von Li, Hongxia, Harrison, Emily B., Li, Huizhong, Hirabayashi, Koichi, Chen, Jing, Li, Qi-Xiang, Gunn, Jared, Weiss, Jared, Savoldo, Barbara, Parker, Joel S., Pecot, Chad V., Dotti, Gianpietro, Du, Hongwei

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ABRA: improved coding indel detection via assembly-based realignment von Mose, Lisle E, Wilkerson, Matthew D, Hayes, D Neil, Perou, Charles M, Parker, Joel S

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RNA polymerase is poised for activation across the genome von Adelman, Karen, Muse, Ginger W, Gilchrist, Daniel A, Nechaev, Sergei, Shah, Ruchir, Parker, Joel S, Grissom, Sherry F, Zeitlinger, Julia

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Randomized Phase II Neoadjuvant Comparison Between Letrozole, Anastrozole, and Exemestane for Postmenopausal Women With Estrogen Receptor–Rich Stage 2 to 3 Breast Cancer: Clinical... von ELLIS, Matthew J, SUMAN, Vera J, ESSERMAN, Laura J, UNZEITIG, Gary W, MARGENTHALER, Julie, BABIERA, Gildy V, KELLY MARCOM, P, GUENTHER, Joseph M, WATSON, Mark A, LEITCH, Marilyn, HUNT, Kelly, OLSON, John A, HOOG, Jeremy, LI LIN, SNIDER, Jacqueline, PRAT, Aleix, PARKER, Joel S, JINGQIN LUO, DESCHRYVER, Katherine, CRAIG ALLRED, D

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ZFX Mediates Non-canonical Oncogenic Functions of the Androgen Receptor Splice Variant 7 in Castrate-Resistant Prostate Cancer von Cai, Ling, Tsai, Yi-Hsuan, Wang, Ping, Wang, Jun, Li, Dongxu, Fan, Huitao, Zhao, Yilin, Bareja, Rohan, Lu, Rui, Wilson, Elizabeth M., Sboner, Andrea, Whang, Young E., Zheng, Deyou, Parker, Joel S., Earp, H. Shelton, Wang, Gang Greg

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Building prognostic models for breast cancer patients using clinical variables and hundreds of gene expression signatures von Fan, Cheng, Prat, Aleix, Parker, Joel S, Liu, Yufeng, Carey, Lisa A, Troester, Melissa A, Perou, Charles M

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Histone deacetylase 11 inhibition promotes breast cancer metastasis from lymph nodes von Leslie, Patrick L., Chao, Yvonne L., Tsai, Yi-Hsuan, Ghosh, Subrata K., Porrello, Alessandro, Van Swearingen, Amanda E. D., Harrison, Emily B., Cooley, Brian C., Parker, Joel S., Carey, Lisa A., Pecot, Chad V.

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Extensive post-transcriptional regulation of microRNAs and its implications for cancer von Thomson, J Michael, Newman, Martin, Parker, Joel S, Morin-Kensicki, Elizabeth M, Wright, Tricia, Hammond, Scott M

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A multi-omic dissection of super-enhancer driven oncogenic gene expression programs in ovarian cancer von Kelly, Michael R., Wisniewska, Kamila, Regner, Matthew J., Lewis, Michael W., Perreault, Andrea A., Davis, Eric S., Phanstiel, Douglas H., Parker, Joel S., Franco, Hector L.

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Tumor Evolution in Two Patients with Basal-like Breast Cancer: A Retrospective Genomics Study of Multiple Metastases von Hoadley, Katherine A, Siegel, Marni B, Kanchi, Krishna L, Miller, Christopher A, Ding, Li, Zhao, Wei, He, Xiaping, Parker, Joel S, Wendl, Michael C, Fulton, Robert S, Demeter, Ryan T, Wilson, Richard K, Carey, Lisa A, Perou, Charles M, Mardis, Elaine R

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Circulating tumor DNA reveals complex biological features with clinical relevance in metastatic breast cancer von Prat, Aleix, Brasó-Maristany, Fara, Martínez-Sáez, Olga, Sanfeliu, Esther, Xia, Youli, Bellet, Meritxell, Galván, Patricia, Martínez, Débora, Pascual, Tomás, Marín-Aguilera, Mercedes, Rodríguez, Anna, Chic, Nuria, Adamo, Barbara, Paré, Laia, Vidal, Maria, Margelí, Mireia, Ballana, Ester, Gómez-Rey, Marina, Oliveira, Mafalda, Felip, Eudald, Matito, Judit, Sánchez-Bayona, Rodrigo, Suñol, Anna, Saura, Cristina, Ciruelos, Eva, Tolosa, Pablo, Muñoz, Montserrat, González-Farré, Blanca, Villagrasa, Patricia, Parker, Joel S., Perou, Charles M., Vivancos, Ana

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