MG-RAST version 4—lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis von Meyer, Folker, Bagchi, Saurabh, Chaterji, Somali, Gerlach, Wolfgang, Grama, Ananth, Harrison, Travis, Paczian, Tobias, Trimble, William L, Wilke, Andreas

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The RAST Server: rapid annotations using subsystems technology von Aziz, Ramy K, Bartels, Daniela, Best, Aaron A, DeJongh, Matthew, Disz, Terrence, Edwards, Robert A, Formsma, Kevin, Gerdes, Svetlana, Glass, Elizabeth M, Kubal, Michael, Meyer, Folker, Olsen, Gary J, Olson, Robert, Osterman, Andrei L, Overbeek, Ross A, McNeil, Leslie K, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Reich, Claudia, Stevens, Rick, Vassieva, Olga, Vonstein, Veronika, Wilke, Andreas, Zagnitko, Olga

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The MG-RAST API explorer: an on-ramp for RESTful query composition von Paczian, Tobias, Trimble, William L, Gerlach, Wolfgang, Harrison, Travis, Wilke, Andreas, Meyer, Folker

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A RESTful API for accessing microbial community data for MG-RAST von Wilke, Andreas, Bischof, Jared, Harrison, Travis, Brettin, Tom, D'Souza, Mark, Gerlach, Wolfgang, Matthews, Hunter, Paczian, Tobias, Wilkening, Jared, Glass, Elizabeth M, Desai, Narayan, Meyer, Folker

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A Metagenomics Portal for a Democratized Sequencing World von Wilke, Andreas, Glass, Elizabeth M., Bartels, Daniela, Bischof, Jared, Braithwaite, Daniel, D’Souza, Mark, Gerlach, Wolfgang, Harrison, Travis, Keegan, Kevin, Matthews, Hunter, Kottmann, Renzo, Paczian, Tobias, Tang, Wei, Trimble, William L., Yilmaz, Pelin, Wilkening, Jared, Desai, Narayan, Meyer, Folker

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The MG-RAST metagenomics database and portal in 2015 von Wilke, Andreas, Bischof, Jared, Gerlach, Wolfgang, Glass, Elizabeth, Harrison, Travis, Keegan, Kevin P, Paczian, Tobias, Trimble, William L, Bagchi, Saurabh, Grama, Ananth, Chaterji, Somali, Meyer, Folker

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The complete genome sequence for putative H2- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome von Handley, Kim M., Bartels, Daniela, O'Loughlin, Edward J., Williams, Kenneth H., Trimble, William L., Skinner, Kelly, Gilbert, Jack A., Desai, Narayan, Glass, Elizabeth M., Paczian, Tobias, Wilke, Andreas, Antonopoulos, Dionysios, Kemner, Kenneth M., Meyer, Folker

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The MG-RAST Metagenomics Database and Portal in 2015 von Wilke, Andreas, Bischof, Jared, Gerlach, Wolfgang, Glass, Elizabeth, Harrison, Travis, Keegan, Kevin, Paczian, Tobias, Trimble, William L., Bagchi, Saurabh, Grama, Ananth, Chaterji, Somali, Meyer, Folker

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A RESTful API for Accessing Microbial Community Data for MG-RAST: e1004008 von Wilke, Andreas, Bischof, Jared, Harrison, Travis, Brettin, Tom, Gerlach, Wolfgang, Matthews, Hunter, Paczian, Tobias, Wilkening, Jared, Glass, Elizabeth M, Desai, Narayan, Meyer, Folker

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National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation von McNeil, Leslie Klis, Reich, Claudia, Aziz, Ramy K, Bartels, Daniela, Cohoon, Matthew, Disz, Terry, Edwards, Robert A, Gerdes, Svetlana, Hwang, Kaitlyn, Kubal, Michael, Margaryan, Gohar Rem, Meyer, Folker, Mihalo, William, Olsen, Gary J, Olson, Robert, Osterman, Andrei, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Rodionov, Dmitry A, Shi, Xinghua, Vassieva, Olga, Vonstein, Veronika, Zagnitko, Olga, Xia, Fangfang, Zinner, Jenifer, Overbeek, Ross, Stevens, Rick

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The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation von Leslie Klis McNeil, Reich, Claudia, Aziz, Ramy K, Bartels, Daniela, Cohoon, Matthew, Disz, Terry, Edwards, Robert A, Gerdes, Svetlana, Hwang, Kaitlyn, Kubal, Michael, Margaryan, Gohar Rem, Meyer, Folker, Mihalo, William, Olsen, Gary J, Olson, Robert

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The complete genome sequence for putative H 2 ‐ and S ‐oxidizer C andidatus Sulfuricurvum sp., assembled de novo from an aquifer‐derived metagenome von Handley, Kim M., Bartels, Daniela, O'Loughlin, Edward J., Williams, Kenneth H., Trimble, William L., Skinner, Kelly, Gilbert, Jack A., Desai, Narayan, Glass, Elizabeth M., Paczian, Tobias, Wilke, Andreas, Antonopoulos, Dionysios, Kemner, Kenneth M., Meyer, Folker

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The complete genome sequence for putative H2- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome: Special Issue on Sulfur Cycle Ecolo... von HANDLEY, Kim M, BARTELS, Daniela, WILKE, Andreas, ANTONOPOULOS, Dionysios, KEMNER, Kenneth M, MEYER, Folker, O'LOUGHLIN, Edward J, WILLIAMS, Kenneth H, TRIMBLE, William L, SKINNER, Kelly, GILBERT, Jack A, DESAI, Narayan, GLASS, Elizabeth M, PACZIAN, Tobias

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Metazen - metadata capture for metagenomes von Bischof, Jared, Harrison, Travis, Paczian, Tobias, Glass, Elizabeth, Wilke, Andreas, Meyer, Folker

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Metazen - metadata capture for metagenomes von Bischof, Jared, Harrison, Travis, Paczian, Tobias, Glass, Elizabeth, Wilke, Andreas, Meyer, Folker

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A RESTful API for accessing microbial community data for MG-RAST von Wilke, Andreas, Bischof, Jared, Harrison, Travis, Brettin, Tom, D'Souza, Mark, Gerlach, Wolfgang, Matthews, Hunter, Paczian, Tobias, Wilkening, Jared, Glass, Elizabeth M, Desai, Narayan, Meyer, Folker

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The RAST Server: Rapid Annotations using Subsystems Technology-2 von Aziz, Ramy K, Bartels, Daniela, Best, Aaron A, DeJongh, Matthew, Disz, Terrence, Edwards, Robert A, Formsma, Kevin, Gerdes, Svetlana, Glass, Elizabeth M, Kubal, Michael, Meyer, Folker, Olsen, Gary J, Olson, Robert, Osterman, Andrei L, Overbeek, Ross A, McNeil, Leslie K, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Reich, Claudia, Stevens, Rick, Vassieva, Olga, Vonstein, Veronika, Wilke, Andreas, Zagnitko, Olga

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The RAST Server: Rapid Annotations using Subsystems Technology-6 von Aziz, Ramy K, Bartels, Daniela, Best, Aaron A, DeJongh, Matthew, Disz, Terrence, Edwards, Robert A, Formsma, Kevin, Gerdes, Svetlana, Glass, Elizabeth M, Kubal, Michael, Meyer, Folker, Olsen, Gary J, Olson, Robert, Osterman, Andrei L, Overbeek, Ross A, McNeil, Leslie K, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Reich, Claudia, Stevens, Rick, Vassieva, Olga, Vonstein, Veronika, Wilke, Andreas, Zagnitko, Olga

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The RAST Server: Rapid Annotations using Subsystems Technology-5 von Aziz, Ramy K, Bartels, Daniela, Best, Aaron A, DeJongh, Matthew, Disz, Terrence, Edwards, Robert A, Formsma, Kevin, Gerdes, Svetlana, Glass, Elizabeth M, Kubal, Michael, Meyer, Folker, Olsen, Gary J, Olson, Robert, Osterman, Andrei L, Overbeek, Ross A, McNeil, Leslie K, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Reich, Claudia, Stevens, Rick, Vassieva, Olga, Vonstein, Veronika, Wilke, Andreas, Zagnitko, Olga

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The RAST Server: Rapid Annotations using Subsystems Technology-0 von Aziz, Ramy K, Bartels, Daniela, Best, Aaron A, DeJongh, Matthew, Disz, Terrence, Edwards, Robert A, Formsma, Kevin, Gerdes, Svetlana, Glass, Elizabeth M, Kubal, Michael, Meyer, Folker, Olsen, Gary J, Olson, Robert, Osterman, Andrei L, Overbeek, Ross A, McNeil, Leslie K, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D, Reich, Claudia, Stevens, Rick, Vassieva, Olga, Vonstein, Veronika, Wilke, Andreas, Zagnitko, Olga

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