Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows von Denisenko, Elena, Guo, Belinda B., Jones, Matthew, Hou, Rui, de Kock, Leanne, Lassmann, Timo, Poppe, Daniel, Clement, Olivier, Simmons, Rebecca K., Lister, Ryan, Forrest, Alistair R. R.

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Comprehensive evaluation of deconvolution methods for human brain gene expression von Sutton, Gavin J., Poppe, Daniel, Simmons, Rebecca K., Walsh, Kieran, Nawaz, Urwah, Lister, Ryan, Gagnon-Bartsch, Johann A., Voineagu, Irina

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Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability von de Mendoza, Alex, Nguyen, Trung Viet, Ford, Ethan, Poppe, Daniel, Buckberry, Sam, Pflueger, Jahnvi, Grimmer, Matthew R., Stolzenburg, Sabine, Bogdanovic, Ozren, Oshlack, Alicia, Farnham, Peggy J., Blancafort, Pilar, Lister, Ryan

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A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation von Grubman, Alexandra, Chew, Gabriel, Ouyang, John F., Sun, Guizhi, Choo, Xin Yi, McLean, Catriona, Simmons, Rebecca K., Buckberry, Sam, Vargas-Landin, Dulce B., Poppe, Daniel, Pflueger, Jahnvi, Lister, Ryan, Rackham, Owen J. L., Petretto, Enrico, Polo, Jose M.

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Modelling human blastocysts by reprogramming fibroblasts into iBlastoids von Liu, Xiaodong, Tan, Jia Ping, Schröder, Jan, Aberkane, Asma, Ouyang, John F., Mohenska, Monika, Lim, Sue Mei, Sun, Yu B. Y., Chen, Joseph, Sun, Guizhi, Zhou, Yichen, Poppe, Daniel, Lister, Ryan, Clark, Amander T., Rackham, Owen J. L., Zenker, Jennifer, Polo, Jose M.

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A modular dCas9-based recruitment platform for combinatorial epigenome editing von Swain, Tessa, Pflueger, Christian, Freytag, Saskia, Poppe, Daniel, Pflueger, Jahnvi, Nguyen, Trung Viet, Li, Ji Kevin, Lister, Ryan

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Development of an Electrochemical Hydrogen Contaminant Detector von Mukundan, Rangachary, Brosha, Eric L., Romero, Christopher J., Poppe, Daniel, Rockward, Tommy

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Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution von Herring, Charles A., Simmons, Rebecca K., Freytag, Saskia, Poppe, Daniel, Moffet, Joel J.D., Pflueger, Jahnvi, Buckberry, Sam, Vargas-Landin, Dulce B., Clément, Olivier, Echeverría, Enrique Goñi, Sutton, Gavin J., Alvarez-Franco, Alba, Hou, Rui, Pflueger, Christian, McDonald, Kerrie, Polo, Jose M., Forrest, Alistair R.R., Nowak, Anna K., Voineagu, Irina, Martelotto, Luciano, Lister, Ryan

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Small molecules enable highly efficient neuronal conversion of human fibroblasts von Ladewig, Julia, Mertens, Jerome, Kesavan, Jaideep, Doerr, Jonas, Poppe, Daniel, Glaue, Finnja, Herms, Stefan, Wernet, Peter, Kögler, Gesine, Müller, Franz-Josef, Koch, Philipp, Brüstle, Oliver

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Excitation-induced ataxin-3 aggregation in neurons from patients with Machado–Joseph disease von Koch, Philipp, Breuer, Peter, Peitz, Michael, Jungverdorben, Johannes, Kesavan, Jaideep, Poppe, Daniel, Doerr, Jonas, Ladewig, Julia, Mertens, Jerome, Tüting, Thomas, Hoffmann, Per, Klockgether, Thomas, Evert, Bernd O., Wüllner, Ullrich, Brüstle, Oliver

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Transient naive reprogramming corrects hiPS cells functionally and epigenetically von Buckberry, Sam, Liu, Xiaodong, Poppe, Daniel, Tan, Jia Ping, Sun, Guizhi, Chen, Joseph, Nguyen, Trung Viet, de Mendoza, Alex, Pflueger, Jahnvi, Frazer, Thomas, Vargas-Landín, Dulce B., Paynter, Jacob M., Smits, Nathan, Liu, Ning, Ouyang, John F., Rossello, Fernando J., Chy, Hun S., Rackham, Owen J. L., Laslett, Andrew L., Breen, James, Faulkner, Geoffrey J., Nefzger, Christian M., Polo, Jose M., Lister, Ryan

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Embryonic Stem Cell–Based Modeling of Tau Pathology in Human Neurons von Mertens, Jerome, Stüber, Kathrin, Poppe, Daniel, Doerr, Jonas, Ladewig, Julia, Brüstle, Oliver, Koch, Philipp

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The emergence of the brain non-CpG methylation system in vertebrates von de Mendoza, Alex, Poppe, Daniel, Buckberry, Sam, Pflueger, Jahnvi, Albertin, Caroline B., Daish, Tasman, Bertrand, Stephanie, de la Calle-Mustienes, Elisa, Gómez-Skarmeta, José Luis, Nery, Joseph R., Ecker, Joseph R., Baer, Boris, Ragsdale, Clifton W., Grützner, Frank, Escriva, Hector, Venkatesh, Byrappa, Bogdanovic, Ozren, Lister, Ryan

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Editors' Choice-Field Trials Testing of Mixed Potential Electrochemical Hydrogen Safety Sensors at Commercial California Hydrogen Filling Stations von Brosha, Eric L., Romero, Christopher J., Poppe, Daniel, Williamson, Todd L., Kreller, Cortney R., Mukundan, Rangachary, Glass, Robert S., Wu, Amanda S.

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Reprogramming roadmap reveals route to human induced trophoblast stem cells von Liu, Xiaodong, Ouyang, John F., Rossello, Fernando J., Tan, Jia Ping, Davidson, Kathryn C., Valdes, Daniela S., Schröder, Jan, Sun, Yu B. Y., Chen, Joseph, Knaupp, Anja S., Sun, Guizhi, Chy, Hun S., Huang, Ziyi, Pflueger, Jahnvi, Firas, Jaber, Tano, Vincent, Buckberry, Sam, Paynter, Jacob M., Larcombe, Michael R., Poppe, Daniel, Choo, Xin Yi, O’Brien, Carmel M., Pastor, William A., Chen, Di, Leichter, Anna L., Naeem, Haroon, Tripathi, Pratibha, Das, Partha P., Grubman, Alexandra, Powell, David R., Laslett, Andrew L., David, Laurent, Nilsson, Susan K., Clark, Amander T., Lister, Ryan, Nefzger, Christian M., Martelotto, Luciano G., Rackham, Owen J. L., Polo, Jose M.

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Embryonic Stem Cell-Derived Neurons as a Model System for Epigenome Maturation during Development von Martin, Sally, Poppe, Daniel, Olova, Nelly, O'Leary, Conor, Ivanova, Elena, Pflueger, Jahnvi, Dechka, Jennifer, Simmons, Rebecca K, Cooper, Helen M, Reik, Wolf, Lister, Ryan, Wolvetang, Ernst J

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Single-nucleus RNA sequencing of pre-malignant liver reveals disease-associated hepatocyte state with HCC prognostic potential von Carlessi, Rodrigo, Denisenko, Elena, Boslem, Ebru, Köhn-Gaone, Julia, Main, Nathan, Abu Bakar, N. Dianah B., Shirolkar, Gayatri D., Jones, Matthew, Beasley, Aaron B., Poppe, Daniel, Dwyer, Benjamin J., Jackaman, Connie, Tjiam, M. Christian, Lister, Ryan, Karin, Michael, Fallowfield, Jonathan A., Kendall, Timothy J., Forbes, Stuart J., Gray, Elin S., Olynyk, John K., Yeoh, George, Forrest, Alistair R.R., Ramm, Grant A., Febbraio, Mark A., Tirnitz-Parker, Janina E.E.

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Transient naive reprogramming corrects hiPS cells functionally and epigenetically [scRNA-Seq] von Poppe, Daniel

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Genome Editing in Neuroepithelial Stem Cells to Generate Human Neurons with High Adenosine‐Releasing Capacity von Poppe, Daniel, Doerr, Jonas, Schneider, Marion, Wilkens, Ruven, Steinbeck, Julius A., Ladewig, Julia, Tam, Allison, Paschon, David E., Gregory, Philip D., Reik, Andreas, Müller, Christa E., Koch, Philipp, Brüstle, Oliver

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(Invited) Field Trials Testing of Mixed Potential Electrochemical Hydrogen Safety Sensors at Commercial California Hydrogen Filling Stations von Brosha, Eric L., Romero, Christopher J., Poppe, Daniel, Williamson, Todd L., Kreller, Cortney R., Mukundan, Rangachary, Glass, Robert S., Wu, Amanda S.

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