Sequence capture by hybridization to explore modern and ancient genomic diversity in model and nonmodel organisms von Gasc, Cyrielle, Peyretaillade, Eric, Peyret, Pierre

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MicroAnnot: A Dedicated Workflow for Accurate Microsporidian Genome Annotation von Tournayre, Jérémy, Polonais, Valérie, Wawrzyniak, Ivan, Akossi, Reginald Florian, Parisot, Nicolas, Lerat, Emmanuelle, Delbac, Frédéric, Souvignet, Pierre, Reichstadt, Matthieu, Peyretaillade, Eric

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Oral exposure to environmental pollutant benzo[a]pyrene impacts the intestinal epithelium and induces gut microbial shifts in murine model von Ribière, Céline, Peyret, Pierre, Parisot, Nicolas, Darcha, Claude, Déchelotte, Pierre J., Barnich, Nicolas, Peyretaillade, Eric, Boucher, Delphine

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Metatranscriptomics Reveals the Active Bacterial and Eukaryotic Fibrolytic Communities in the Rumen of Dairy Cow Fed a Mixed Diet von Comtet-Marre, Sophie, Parisot, Nicolas, Lepercq, Pascale, Chaucheyras-Durand, Frédérique, Mosoni, Pascale, Peyretaillade, Eric, Bayat, Ali R, Shingfield, Kevin J, Peyret, Pierre, Forano, Evelyne

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Identification and localization of polar tube proteins in the extruded polar tube of the microsporidian Anncaliia algerae von Fayet, Maurine, Prybylski, Nastasia, Collin, Marie-Laure, Peyretaillade, Eric, Wawrzyniak, Ivan, Belkorchia, Abdel, Akossi, Reginald Florian, Diogon, Marie, El Alaoui, Hicham, Polonais, Valérie, Delbac, Frédéric

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Environmental Pollutant Benzo[ a ]Pyrene Impacts the Volatile Metabolome and Transcriptome of the Human Gut Microbiota von Defois, Clémence, Ratel, Jérémy, Denis, Sylvain, Batut, Bérénice, Beugnot, Réjane, Peyretaillade, Eric, Engel, Erwan, Peyret, Pierre

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Genome Sequence of “Candidatus Methanomethylophilus alvus” Mx1201, a Methanogenic Archaeon from the Human Gut Belonging to a Seventh Order of Methanogens von Borrel, Guillaume, Harris, Hugh M. B, Tottey, William, Mihajlovski, Agnès, Parisot, Nicolas, Peyretaillade, Eric, Peyret, Pierre, Gribaldo, Simonetta, O'Toole, Paul W, Brugère, Jean-François

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Genome-Wide Analysis of Antigen 43 (Ag43) Variants: New Insights in Their Diversity, Distribution and Prevalence in Bacteria von Ageorges, Valentin, Wawrzyniak, Ivan, Ruiz, Philippe, Bicep, Cédric, Zorgani, Mohamed A, Paxman, Jason J, Heras, Begoña, Henderson, Ian R, Leroy, Sabine, Bailly, Xavier, Sapountzis, Panagiotis, Peyretaillade, Eric, Desvaux, Mickaël

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Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes von Biderre-Petit, Corinne, Dugat-Bony, Eric, Mege, Mickaël, Parisot, Nicolas, Adrian, Lorenz, Moné, Anne, Denonfoux, Jérémie, Peyretaillade, Eric, Debroas, Didier, Boucher, Delphine, Peyret, Pierre

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Complete genome sequence of Crohn's disease-associated adherent-invasive E. coli strain LF82 von Miquel, Sylvie, Peyretaillade, Eric, Claret, Laurent, de Vallée, Amélie, Dossat, Carole, Vacherie, Benoit, Zineb, El Hajji, Segurens, Beatrice, Barbe, Valerie, Sauvanet, Pierre, Neut, Christel, Colombel, Jean-Frédéric, Medigue, Claudine, Mojica, Francisco J M, Peyret, Pierre, Bonnet, Richard, Darfeuille-Michaud, Arlette

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The intracellular parasite Anncaliia algerae induces a massive miRNA down-regulation in human cells von Akossi, Reginald Florian, Delbac, Fréderic, El Alaoui, Hicham, Wawrzyniak, Ivan, Peyretaillade, Eric

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The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level von Tottey, William, Denonfoux, Jeremie, Jaziri, Faouzi, Parisot, Nicolas, Missaoui, Mohiedine, Hill, David, Borrel, Guillaume, Peyretaillade, Eric, Alric, Monique, Harris, Hugh M B, Jeffery, Ian B, Claesson, Marcus J, O'Toole, Paul W, Peyret, Pierre, Brugère, Jean-François

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Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae von Panek, Johan, El Alaoui, Hicham, Mone, Anne, Urbach, Serge, Demettre, Edith, Texier, Catherine, Brun, Christine, Zanzoni, Andreas, Peyretaillade, Eric, Parisot, Nicolas, Lerat, Emmanuelle, Peyret, Pierre, Delbac, Frederic, Biron, David G

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Solution hybrid selection capture for the recovery of functional full-length eukaryotic cDNAs from complex environmental samples von Bragalini, Claudia, Ribière, Céline, Parisot, Nicolas, Vallon, Laurent, Prudent, Elsa, Peyretaillade, Eric, Girlanda, Mariangela, Peyret, Pierre, Marmeisse, Roland, Luis, Patricia

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The Prediction and Validation of Small CDSs Expand the Gene Repertoire of the Smallest Known Eukaryotic Genomes von Belkorchia, Abdel, Gasc, Cyrielle, Polonais, Valérie, Parisot, Nicolas, Gallois, Nicolas, Ribière, Céline, Lerat, Emmanuelle, Gaspin, Christine, Pombert, Jean-François, Peyret, Pierre, Peyretaillade, Eric

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In situ TCE degradation mediated by complex dehalorespiring communities during biostimulation processes von Dugat‐Bony, Eric, Biderre‐Petit, Corinne, Jaziri, Faouzi, David, Maude M., Denonfoux, Jérémie, Lyon, Delina Y., Richard, Jean‐Yves, Curvers, Cyrille, Boucher, Delphine, Vogel, Timothy M., Peyretaillade, Eric, Peyret, Pierre

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Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation von Peyretaillade, Eric, Gonçalves, Olivier, Terrat, Sébastien, Dugat-Bony, Eric, Wincker, Patrick, Cornman, Robert S, Evans, Jay D, Delbac, Frédéric, Peyret, Pierre

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Detecting variants with Metabolic Design, a new software tool to design probes for explorative functional DNA microarray development von Terrat, Sébastien, Peyretaillade, Eric, Gonçalves, Olivier, Dugat-Bony, Eric, Gravelat, Fabrice, Moné, Anne, Biderre-Petit, Corinne, Boucher, Delphine, Troquet, Julien, Peyret, Pierre

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How to overcome constraints imposed by microsporidian genome features to ensure gene prediction? von Peyretaillade, Eric, Akossi, Reginal F., Tournayre, Jérémy, Delbac, Frédéric, Wawrzyniak, Ivan

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Functional characteristics of a highly specific integrase encoded by an LTR-retrotransposon von Faye, Babacar, Arnaud, Frederick, Peyretaillade, Eric, Brasset, Emilie, Dastugue, Bernard, Vaury, Chantal

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