Mechanistic Modeling of SARS‐CoV‐2 and Other Infectious Diseases and the Effects of Therapeutics von Perelson, Alan S., Ke, Ruian

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Post-treatment control of HIV infection von Conway, Jessica M., Perelson, Alan S.

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Modeling the within-host dynamics of HIV infection von Perelson, Alan S, Ribeiro, Ruy M

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Modeling latently infected cell activation: viral and latent reservoir persistence, and viral blips in HIV-infected patients on potent therapy von Rong, Libin, Perelson, Alan S

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Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action von Czuppon, Peter, Debarre, Florence, Goncalves, Antonio, Tenaillon, Olivier, Perelson, Alan S., Guedj, Jeremie, Blanquart, Francois

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Competitive exclusion by autologous antibodies can prevent broad HIV-1 antibodies from arising von Luo, Shishi, Perelson, Alan S.

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Modeling within-host dynamics of influenza virus infection including immune responses von Pawelek, Kasia A, Huynh, Giao T, Quinlivan, Michelle, Cullinane, Ann, Rong, Libin, Perelson, Alan S

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Persistent HIV-1 replication is associated with lower antiretroviral drug concentrations in lymphatic tissues von Fletcher, Courtney V., Staskus, Kathryn, Wietgrefe, Stephen W., Rothenberger, Meghan, Reilly, Cavan, Chipman, Jeffrey G., Beilman, Greg J., Khoruts, Alexander, Thorkelson, Ann, Schmidt, Thomas E., Anderson, Jodi, Perkey, Katherine, Stevenson, Mario, Perelson, Alan S., Douek, Daniel C., Haase, Ashley T., Schacker, Timothy W.

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Modeling shows that the NS5A inhibitor daclatasvir has two modes of action and yields a shorter estimate of the hepatitis C virus half-life von Guedj, Jeremie, Dahari, Harel, Rong, Libin, Sansone, Natasha D., Nettles, Richard E., Cotler, Scott J., Layden, Thomas J., Uprichard, Susan L., Perelson, Alan S.

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A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2 von Kim, Kwang Su, Ejima, Keisuke, Iwanami, Shoya, Fujita, Yasuhisa, Ohashi, Hirofumi, Koizumi, Yoshiki, Asai, Yusuke, Nakaoka, Shinji, Watashi, Koichi, Aihara, Kazuyuki, Thompson, Robin N., Ke, Ruian, Perelson, Alan S., Iwami, Shingo, Roberts, Roland G., Roberts, Roland G., Roberts, Roland G.

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Timing of Antiviral Treatment Initiation is Critical to Reduce SARS‐CoV‐2 Viral Load von Gonçalves, Antonio, Bertrand, Julie, Ke, Ruian, Comets, Emmanuelle, Lamballerie, Xavier, Malvy, Denis, Pizzorno, Andrés, Terrier, Olivier, Rosa Calatrava, Manuel, Mentré, France, Smith, Patrick, Perelson, Alan S., Guedj, Jérémie

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Zika Virus Persistence in the Central Nervous System and Lymph Nodes of Rhesus Monkeys von Aid, Malika, Abbink, Peter, Larocca, Rafael A., Boyd, Michael, Nityanandam, Ramya, Nanayakkara, Ovini, Martinot, Amanda J., Moseley, Edward T., Blass, Eryn, Borducchi, Erica N., Chandrashekar, Abishek, Brinkman, Amanda L., Molloy, Katherine, Jetton, David, Tartaglia, Lawrence J., Liu, Jinyan, Best, Katharine, Perelson, Alan S., De La Barrera, Rafael A., Lewis, Mark G., Barouch, Dan H.

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How robust are estimates of key parameters in standard viral dynamic models? von Zitzmann, Carolin, Ke, Ruian, Ribeiro, Ruy M, Perelson, Alan S

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Stochastic theory of early viral infection: continuous versus burst production of virions von Pearson, John E, Krapivsky, Paul, Perelson, Alan S

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Modeling resistance to the broadly neutralizing antibody PGT121 in people living with HIV-1 von Cassidy, Tyler, Stephenson, Kathryn E, Barouch, Dan H, Perelson, Alan S

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Impact of different oseltamivir regimens on treating influenza A virus infection and resistance emergence: insights from a modelling study von Canini, Laetitia, Conway, Jessica M, Perelson, Alan S, Carrat, Fabrice

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Mathematical modeling of hepatitis C RNA replication, exosome secretion and virus release von Zitzmann, Carolin, Kaderali, Lars, Perelson, Alan S.

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Residual Viremia in Treated HIV+ Individuals von Conway, Jessica M, Perelson, Alan S

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Modelling the effects of phylogeny and body size on within-host pathogen replication and immune response von Banerjee, Soumya, Perelson, Alan S., Moses, Melanie

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A simple model of COVID-19 explains disease severity and the effect of treatments von Sanche, Steven, Cassidy, Tyler, Chu, Pinghan, Perelson, Alan S., Ribeiro, Ruy M., Ke, Ruian

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