Molecular Dynamics Simulations of Membrane Permeability von Venable, Richard M, Krämer, Andreas, Pastor, Richard W

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Hexagonal Substructure and Hydrogen Bonding in Liquid-Ordered Phases Containing Palmitoyl Sphingomyelin von Sodt, Alexander J., Pastor, Richard W., Lyman, Edward

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CHARMM All-Atom Additive Force Field for Sphingomyelin: Elucidation of Hydrogen Bonding and of Positive Curvature von Venable, Richard M., Sodt, Alexander J., Rogaski, Brent, Rui, Huan, Hatcher, Elizabeth, MacKerell, Alexander D., Pastor, Richard W., Klauda, Jeffery B.

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Mechanical properties of lipid bilayers from molecular dynamics simulation von Venable, Richard M., Brown, Frank L.H., Pastor, Richard W.

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Initiation and evolution of pores formed by influenza fusion peptides probed by lysolipid inclusion von Rice, Amy, Zimmerberg, Joshua, Pastor, Richard W.

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Characterization of Specific Ion Effects on PI(4,5)P2 Clustering: Molecular Dynamics Simulations and Graph-Theoretic Analysis von Han, Kyungreem, Gericke, Arne, Pastor, Richard W

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Binary bilayer simulations for partitioning within membranes von Park, Soohyung, Pastor, Richard W, Im, Wonpil

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Bending Free Energy from Simulation: Correspondence of Planar and Inverse Hexagonal Lipid Phases von Sodt, Alexander J., Pastor, Richard W.

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Permeability of membranes in the liquid ordered and liquid disordered phases von Ghysels, An, Krämer, Andreas, Venable, Richard M., Teague, Walter E., Lyman, Edward, Gawrisch, Klaus, Pastor, Richard W.

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Simulations of Anionic Lipid Membranes: Development of Interaction-Specific Ion Parameters and Validation Using NMR Data von Venable, Richard M, Luo, Yun, Gawrisch, Klaus, Roux, Benoît, Pastor, Richard W

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Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types von Klauda, Jeffery B, Venable, Richard M, Freites, J. Alfredo, O’Connor, Joseph W, Tobias, Douglas J, Mondragon-Ramirez, Carlos, Vorobyov, Igor, MacKerell, Alexander D, Pastor, Richard W

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Special issue for Klaus Gawrisch von Zimmerberg, Joshua, Soubias, Olivier, Pastor, Richard W.

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Pathway of pore formation by influenza fusion peptides investigated in atomistic detail von Rice, Amy, Zimmerberg, Joshua, Pastor, Richard W.

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The Molecular Structure of the Liquid-Ordered Phase of Lipid Bilayers von Sodt, Alexander J, Sandar, Michael Logan, Gawrisch, Klaus, Pastor, Richard W, Lyman, Edward

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Ion-Induced PIP2 Clustering with Martini3: Modification of Phosphate–Ion Interactions and Comparison with CHARMM36 von Jarin, Zack, Venable, Richard M., Han, Kyungreem, Pastor, Richard W.

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CHARMM Additive All-Atom Force Field for Glycosidic Linkages between Hexopyranoses von Guvench, Olgun, Hatcher, Elizabeth, Venable, Richard M, Pastor, Richard W, MacKerell, Alexander D

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Position-Dependent Diffusion Tensors in Anisotropic Media from Simulation: Oxygen Transport in and through Membranes von Ghysels, An, Venable, Richard M, Pastor, Richard W, Hummer, Gerhard

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Developing initial conditions for simulations of asymmetric membranes: a practical recommendation von Park, Soohyung, Im, Wonpil, Pastor, Richard W.

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Molecular dynamics simulations of lipid nanodiscs von Pourmousa, Mohsen, Pastor, Richard W.

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Molecular Modeling of Lipid Membrane Curvature Induction by a Peptide: More than Simply Shape von Sodt, Alexander J., Pastor, Richard W.

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