RNA-combine: a toolkit for comprehensive analyses on transcriptome data from different sequencing platforms von Dong, Xuemin, Dong, Shanshan, Pan, Shengkai, Zhan, Xiangjiang

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Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus) von Dong, Yang, Xie, Min, Jiang, Yu, Xiao, Nianqing, Du, Xiaoyong, Zhang, Wenguang, Tosser-Klopp, Gwenola, Wang, Jinhuan, Yang, Shuang, Liang, Jie, Chen, Wenbin, Chen, Jing, Zeng, Peng, Hou, Yong, Bian, Chao, Pan, Shengkai, Li, Yuxiang, Liu, Xin, Wang, Wenliang, Servin, Bertrand, Sayre, Brian, Zhu, Bin, Sweeney, Deacon, Moore, Rich, Nie, Wenhui, Shen, Yongyi, Zhao, Ruoping, Zhang, Guojie, Li, Jinquan, Faraut, Thomas, Womack, James, Zhang, Yaping, Kijas, James, Cockett, Noelle, Xu, Xun, Zhao, Shuhong, Wang, Jun, Wang, Wen

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The sheep genome illuminates biology of the rumen and lipid metabolism von Jiang, Yu, Xie, Min, Chen, Wenbin, Talbot, Richard, Maddox, Jillian F., Faraut, Thomas, Wu, Chunhua, Muzny, Donna M., Li, Yuxiang, Zhang, Wenguang, Stanton, Jo-Ann, Brauning, Rudiger, Barris, Wesley C., Hourlier, Thibaut, Aken, Bronwen L., Searle, Stephen M. J., Adelson, David L., Bian, Chao, Cam, Graham R., Chen, Yulin, Cheng, Shifeng, DeSilva, Udaya, Dixen, Karen, Dong, Yang, Fan, Guangyi, Franklin, Ian R., Fu, Shaoyin, Fuentes-Utrilla, Pablo, Guan, Rui, Highland, Margaret A., Holder, Michael E., Huang, Guodong, Ingham, Aaron B., Jhangiani, Shalini N., Kalra, Divya, Kovar, Christie L., Lee, Sandra L., Liu, Weiqing, Liu, Xin, Lu, Changxin, Lv, Tian, Mathew, Tittu, McWilliam, Sean, Menzies, Moira, Pan, Shengkai, Robelin, David, Servin, Bertrand, Townley, David, Wang, Wenliang, Wei, Bin, White, Stephen N., Yang, Xinhua, Ye, Chen, Yue, Yaojing, Zeng, Peng, Zhou, Qing, Hansen, Jacob B., Kristiansen, Karsten, Gibbs, Richard A., Flicek, Paul, Warkup, Christopher C., Jones, Huw E., Oddy, V. Hutton, Nicholas, Frank W., McEwan, John C., Kijas, James W., Wang, Jun, Worley, Kim C., Archibald, Alan L., Cockett, Noelle, Xu, Xun, Wang, Wen, Dalrymple, Brian P.

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The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line von Xu, Xun, Nagarajan, Harish, Lewis, Nathan E, Pan, Shengkai, Cai, Zhiming, Liu, Xin, Chen, Wenbin, Xie, Min, Wang, Wenliang, Hammond, Stephanie, Andersen, Mikael R, Neff, Norma, Passarelli, Benedetto, Koh, Winston, Fan, H Christina, Wang, Jianbin, Gui, Yaoting, Lee, Kelvin H, Betenbaugh, Michael J, Quake, Stephen R, Famili, Iman, Palsson, Bernhard O, Wang, Jun

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The yak genome and adaptation to life at high altitude von Qiu, Qiang, Zhang, Guojie, Ma, Tao, Qian, Wubin, Wang, Junyi, Ye, Zhiqiang, Cao, Changchang, Hu, Quanjun, Kim, Jaebum, Larkin, Denis M, Auvil, Loretta, Capitanu, Boris, Ma, Jian, Lewin, Harris A, Qian, Xiaoju, Lang, Yongshan, Zhou, Ran, Wang, Lizhong, Wang, Kun, Xia, Jinquan, Liao, Shengguang, Pan, Shengkai, Lu, Xu, Hou, Haolong, Wang, Yan, Zang, Xuetao, Yin, Ye, Ma, Hui, Zhang, Jian, Wang, Zhaofeng, Zhang, Yingmei, Zhang, Dawei, Yonezawa, Takahiro, Hasegawa, Masami, Zhong, Yang, Liu, Wenbin, Zhang, Yan, Huang, Zhiyong, Zhang, Shengxiang, Long, Ruijun, Yang, Huanming, Wang, Jian, Lenstra, Johannes A, Cooper, David N, Wu, Yi, Wang, Jun, Shi, Peng, Wang, Jian, Liu, Jianquan

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Genomic analysis of the domestication and post-Spanish conquest evolution of the llama and alpaca von Fan, Ruiwen, Gu, Zhongru, Guang, Xuanmin, Marín, Juan Carlos, Varas, Valeria, González, Benito A, Wheeler, Jane C, Hu, Yafei, Li, Erli, Sun, Xiaohui, Yang, Xukui, Zhang, Chi, Gao, Wenjun, He, Junping, Munch, Kasper, Corbett-Detig, Russel, Barbato, Mario, Pan, Shengkai, Zhan, Xiangjiang, Bruford, Michael W, Dong, Changsheng

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Convergent genomic signatures of flight loss in birds suggest a switch of main fuel von Pan, Shengkai, Lin, Yi, Liu, Qiong, Duan, Jinzhi, Lin, Zhenzhen, Wang, Yusong, Wang, Xueli, Lam, Sin Man, Zou, Zhen, Shui, Guanghou, Zhang, Yu, Zhang, Zhengwang, Zhan, Xiangjiang

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A single mutation underlying phenotypic convergence for hypoxia adaptation on the Qinghai-Tibetan Plateau von Xu, Dongming, Yang, Cuiping, Shen, Qiushuo, Pan, Shengkai, Liu, Zhen, Zhang, Tongzuo, Zhou, Xin, Lei, Menglong, Chen, Peng, Yang, Hui, Zhang, Tao, Guo, Yuanting, Zhan, Xiangjiang, Chen, Yongbin, Shi, Peng

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Arctic introgression and chromatin regulation facilitated rapid Qinghai-Tibet Plateau colonization by an avian predator von Hu, Li, Long, Juan, Lin, Yi, Gu, Zhongru, Su, Han, Dong, Xuemin, Lin, Zhenzhen, Xiao, Qian, Batbayar, Nyambayar, Bold, Batbayar, Deutschová, Lucia, Ganusevich, Sergey, Sokolov, Vasiliy, Sokolov, Aleksandr, Patel, Hardip R., Waters, Paul D., Graves, Jennifer Ann Marshall, Dixon, Andrew, Pan, Shengkai, Zhan, Xiangjiang

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Population transcriptomes reveal synergistic responses of DNA polymorphism and RNA expression to extreme environments on the Qinghai–Tibetan Plateau in a predatory bird von Pan, Shengkai, Zhang, Tongzuo, Rong, Zhengqin, Hu, Li, Gu, Zhongru, Wu, Qi, Dong, Shanshan, Liu, Qiong, Lin, Zhenzhen, Deutschova, Lucia, Li, Xinhai, Dixon, Andrew, Bruford, Michael W., Zhan, Xiangjiang

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Author Correction: Arctic introgression and chromatin regulation facilitated rapid Qinghai-Tibet Plateau colonization by an avian predator von Hu, Li, Long, Juan, Lin, Yi, Gu, Zhongru, Su, Han, Dong, Xuemin, Lin, Zhenzhen, Xiao, Qian, Batbayar, Nyambayar, Bold, Batbayar, Deutschová, Lucia, Ganusevich, Sergey, Sokolov, Vasiliy, Sokolov, Aleksandr, Patel, Hardip R., Waters, Paul D., Graves, Jennifer Ann Marshall, Dixon, Andrew, Pan, Shengkai, Zhan, Xiangjiang

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Performance comparison of different microbial DNA extraction methods on bird feces von Hou, Xian, Pan, Shengkai, Lin, Zhenzhen, Xu, Jiliang, Zhan, Xiangjiang

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Correction to: Performance comparison of different microbial DNA extraction methods on bird feces von Hou, Xian, Pan, Shengkai, Lin, Zhenzhen, Xu, Jiliang, Zhan, Xiangjiang

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Camelid genomes reveal evolution and adaptation to desert environments von Wu, Huiguang, Guang, Xuanmin, Al-Fageeh, Mohamed B., Cao, Junwei, Pan, Shengkai, Zhou, Huanmin, Zhang, Li, Abutarboush, Mohammed H., Xing, Yanping, Xie, Zhiyuan, Alshanqeeti, Ali S., Zhang, Yanru, Yao, Qiulin, Al-Shomrani, Badr M., Zhang, Dong, Li, Jiang, Manee, Manee M., Yang, Zili, Yang, Linfeng, Liu, Yiyi, Zhang, Jilin, Altammami, Musaad A., Wang, Shenyuan, Yu, Lili, Zhang, Wenbin, Liu, Sanyang, Ba, La, Liu, Chunxia, Yang, Xukui, Meng, Fanhua, Wang, Shaowei, Li, Lu, Li, Erli, Li, Xueqiong, Wu, Kaifeng, Zhang, Shu, Wang, Junyi, Yin, Ye, Yang, Huanming, Al-Swailem, Abdulaziz M., Wang, Jun

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Enhanced Transcriptomic Resilience following Increased Alternative Splicing and Differential Isoform Production between Air Pollution Conurbations von Pan, Shengkai, Feng, Xiaokai, Pass, Daniel, Adams, Rachel A., Wang, Yusong, Dong, Xuemin, Lin, Zhenzhen, Jiang, Chunguo, Jones, Tim P., BéruBé, Kelly A., Zhan, Xiangjiang

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Global patterns of human–wildlife spatial associations and implications for differentiating conservation strategies von Zhang, Chengcheng, Wang, Yihong, Chang, Jiang, Li, Junsheng, Pan, Shengkai, Yang, Biao, Zhan, Xiangjiang, Dai, Qiang

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Climate-driven flyway changes and memory-based long-distance migration von Gu, Zhongru, Pan, Shengkai, Lin, Zhenzhen, Hu, Li, Dai, Xiaoyang, Chang, Jiang, Xue, Yuanchao, Su, Han, Long, Juan, Sun, Mengru, Ganusevich, Sergey, Sokolov, Vasiliy, Sokolov, Aleksandr, Pokrovsky, Ivan, Ji, Fen, Bruford, Michael W., Dixon, Andrew, Zhan, Xiangjiang

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Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential von Zhang, Gengyun, Liu, Xin, Quan, Zhiwu, Cheng, Shifeng, Xu, Xun, Pan, Shengkai, Xie, Min, Zeng, Peng, Yue, Zhen, Wang, Wenliang, Tao, Ye, Bian, Chao, Han, Changlei, Xia, Qiuju, Peng, Xiaohua, Cao, Rui, Yang, Xinhua, Zhan, Dongliang, Hu, Jingchu, Zhang, Yinxin, Li, Henan, Li, Hua, Li, Ning, Wang, Junyi, Wang, Chanchan, Wang, Renyi, Guo, Tao, Cai, Yanjie, Liu, Chengzhang, Xiang, Haitao, Shi, Qiuxiang, Huang, Ping, Chen, Qingchun, Li, Yingrui, Wang, Jun, Zhao, Zhihai, Wang, Jian

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Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation von Jia, Jizeng, Zhao, Shancen, Kong, Xiuying, Li, Yingrui, Zhao, Guangyao, He, Weiming, Appels, Rudi, Pfeifer, Matthias, Tao, Yong, Zhang, Xueyong, Jing, Ruilian, Zhang, Chi, Ma, Youzhi, Gao, Lifeng, Gao, Chuan, Spannagl, Manuel, Mayer, Klaus F. X., Li, Dong, Pan, Shengkai, Zheng, Fengya, Hu, Qun, Xia, Xianchun, Li, Jianwen, Liang, Qinsi, Chen, Jie, Wicker, Thomas, Gou, Caiyun, Kuang, Hanhui, He, Genyun, Luo, Yadan, Keller, Beat, Xia, Qiuju, Lu, Peng, Wang, Junyi, Zou, Hongfeng, Zhang, Rongzhi, Xu, Junyang, Gao, Jinlong, Middleton, Christopher, Quan, Zhiwu, Liu, Guangming, Wang, Jian, Yang, Huanming, Liu, Xu, He, Zhonghu, Mao, Long, Wang, Jun

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The tomato genome sequence provides insights into fleshy fruit evolution von Tomato Genome Consortium, Sato, S, Guigó Serra, Roderic, Cámara, Francisco, Gianese, S

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