VISTA: computational tools for comparative genomics von Frazer, Kelly A., Pachter, Lior, Poliakov, Alexander, Rubin, Edward M., Dubchak, Inna

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Pseudoalignment for metagenomic read assignment von Schaeffer, L, Pimentel, H, Bray, N, Melsted, P, Pachter, L

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Divergent effects of RIP1 or RIP3 blockade in murine models of acute liver injury von Deutsch, M, Graffeo, C S, Rokosh, R, Pansari, M, Ochi, A, Levie, E M, Van Heerden, E, Tippens, D M, Greco, S, Barilla, R, Tomkötter, L, Zambirinis, C P, Avanzi, N, Gulati, R, Pachter, H L, Torres-Hernandez, A, Eisenthal, A, Daley, D, Miller, G

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Optimization of air vehicles operations using mixed-integer linear programming von Schumacher, C, Chandler, P R, Pachter, M, Pachter, L S

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VISTA : visualizing global DNA sequence alignments of arbitrary length von Mayor, Chris, Brudno, Michael, Schwartz, Jody R., Poliakov, Alexander, Rubin, Edward M., Frazer, Kelly A., Pachter, Lior S., Dubchak, Inna

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Can the location of the CT whirl sign assist in differentiating sigmoid from caecal volvulus? von Macari, M, Spieler, B, Babb, J, Pachter, H.L

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Active conservation of noncoding sequences revealed by three-way species comparisons von Dubchak, I, Brudno, M, Loots, G G, Pachter, L, Mayor, C, Rubin, E M, Frazer, K A

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CT of jejunal diverticulitis: imaging findings, differential diagnosis, and clinical management von Macari, M, Faust, M, Liang, H, Pachter, H.L

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Reconstructing trees from subtree weights von Pachter, L, Speyer, D

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Changing patterns in the management of splenic trauma: the impact of nonoperative management von Pachter, H L, Guth, A A, Hofstetter, S R, Spencer, F C

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Bioinformatics for whole-genome shotgun sequencing of microbial communities von Chen, Kevin, Pachter, Lior

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False-Positive Rate of Positron Emission Tomography/Computed Tomography for Presumed Solitary Metastatic Adrenal Disease in Patients with Known Malignancy von Kuritzkes, Benjamin, Parikh, Manish, Melamed, Jonathan, Hindman, Nicole, Pachter, H. L.

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MAVID: constrained ancestral alignment of multiple sequences von Bray, Nicolas, Pachter, Lior

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Domestic violence and the trauma surgeon von Guth, Amber A, Pachter, H.Leon

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AVID: A global alignment program von Bray, Nick, Dubchak, Inna, Pachter, Lior

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The current status of nonoperative management of adult blunt hepatic injuries von Leon Pachter, H., Hofstetter, Steven R.

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QS475. In States of Hepatic Cirrhosis, Liver Dendritic Cells Control the Hepatic Cytokine Milieu and Gain Enhanced Capacity to Stimulate Innate and Adaptive Immunity von Mitchell, A, Connolly, M, Bedrosian, A, Pachter, L, Miller, G

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Tropical Geometry of Statistical Models von Pachter, Lior, Sturmfels, Bernd, Fienberg, Stephen E.

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Accurate identification of novel human genes through simultaneous gene prediction in human, mouse, and rat von Dewey, Colin, Wu, Jia Qian, Cawley, Simon, Alexandersson, Marina, Gibbs, Richard, Pachter, Lior

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Phylogenetic Shadowing of Primate Sequences to Find Functional Regions of the Human Genome von Boffelli, Dario, McAuliffe, Jon, Ovcharenko, Dmitriy, Lewis, Keith D., Ovcharenko, Ivan, Pachter, Lior, Rubin, Edward M.

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