Symbiotic Bacterial Metabolites Regulate Gastrointestinal Barrier Function via the Xenobiotic Sensor PXR and Toll-like Receptor 4 von Venkatesh, Madhukumar, Mukherjee, Subhajit, Wang, Hongwei, Li, Hao, Sun, Katherine, Benechet, Alexandre P., Qiu, Zhijuan, Maher, Leigh, Redinbo, Matthew R., Phillips, Robert S., Fleet, James C., Kortagere, Sandhya, Mukherjee, Paromita, Fasano, Alessio, Le Ven, Jessica, Nicholson, Jeremy K., Dumas, Marc E., Khanna, Kamal M., Mani, Sridhar

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From phase to microphase separation in flocking models: the essential role of nonequilibrium fluctuations von Solon, Alexandre P, Chaté, Hugues, Tailleur, Julien

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A cis-regulatory atlas in maize at single-cell resolution von Marand, Alexandre P., Chen, Zongliang, Gallavotti, Andrea, Schmitz, Robert J.

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GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens von Zhou, Zhemin, Alikhan, Nabil-Fareed, Sergeant, Martin J, Luhmann, Nina, Vaz, Cátia, Francisco, Alexandre P, Carriço, João André, Achtman, Mark

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Thallium isotopes reveal protracted anoxia during the Toarcian (Early Jurassic) associated with volcanism, carbon burial, and mass extinction von Them, Theodore R., Gill, Benjamin C., Caruthers, Andrew H., Gerhardt, Angela M., Gröcke, Darren R., Lyons, Timothy W., Marroquín, Selva M., Nielsen, Sune G., Alexandre, João P. Trabucho, Owens, Jeremy D.

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Ions at the air-water interface: an end to a hundred-year-old mystery? von Levin, Yan, dos Santos, Alexandre P, Diehl, Alexandre

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Misassignment of patients in meta-analysis of polymyxin B von Zavascki, Alexandre P.

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Dynamics and genomic landscape of CD8+ T cells undergoing hepatic priming von Bénéchet, Alexandre P., De Simone, Giorgia, Di Lucia, Pietro, Cilenti, Francesco, Barbiera, Giulia, Le Bert, Nina, Fumagalli, Valeria, Lusito, Eleonora, Moalli, Federica, Bianchessi, Valentina, Andreata, Francesco, Zordan, Paola, Bono, Elisa, Giustini, Leonardo, Bonilla, Weldy V., Bleriot, Camille, Kunasegaran, Kamini, Gonzalez-Aseguinolaza, Gloria, Pinschewer, Daniel D., Kennedy, Patrick T. F., Naldini, Luigi, Kuka, Mirela, Ginhoux, Florent, Cantore, Alessio, Bertoletti, Antonio, Ostuni, Renato, Guidotti, Luca G., Iannacone, Matteo

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Generic Long-Range Interactions Between Passive Bodies in an Active Fluid von Baek, Yongjoo, Solon, Alexandre P, Xu, Xinpeng, Nikola, Nikolai, Kafri, Yariv

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Electrolytes between dielectric charged surfaces: Simulations and theory von dos Santos, Alexandre P, Levin, Yan

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Phase Transition in Protocols Minimizing Work Fluctuations von Solon, Alexandre P, Horowitz, Jordan M

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PHYLOViZ 2.0: providing scalable data integration and visualization for multiple phylogenetic inference methods von Nascimento, Marta, Sousa, Adriano, Ramirez, Mário, Francisco, Alexandre P, Carriço, João A, Vaz, Cátia

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Generalized thermodynamics of motility-induced phase separation: phase equilibria, Laplace pressure, and change of ensembles von Solon, Alexandre P, Stenhammar, Joakim, Cates, Michael E, Kafri, Yariv, Tailleur, Julien

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cis-Regulatory Elements in Plant Development, Adaptation, and Evolution von Marand, Alexandre P, Eveland, Andrea L, Kaufmann, Kerstin, Springer, Nathan M

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Active Particles with Soft and Curved Walls: Equation of State, Ratchets, and Instabilities von Nikola, Nikolai, Solon, Alexandre P, Kafri, Yariv, Kardar, Mehran, Tailleur, Julien, Voituriez, Raphaël

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Nephrotoxicity of Polymyxins: Is There Any Difference between Colistimethate and Polymyxin B? von Zavascki, Alexandre P, Nation, Roger L

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PHYLOViZ Online: web-based tool for visualization, phylogenetic inference, analysis and sharing of minimum spanning trees von Ribeiro-Gonçalves, Bruno, Francisco, Alexandre P., Vaz, Cátia, Ramirez, Mario, Carrico, Joao

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Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato von Zeng, Zixian, Zhang, Wenli, Marand, Alexandre P, Zhu, Bo, Buell, C Robin, Jiang, Jiming

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PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods von Francisco, Alexandre P, Vaz, Cátia, Monteiro, Pedro T, Melo-Cristino, José, Ramirez, Mário, Carriço, Joäo A

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NLRP3 inflammasome-driven pathways in depression: Clinical and preclinical findings von Kaufmann, Fernanda N, Costa, Ana Paula, Ghisleni, Gabriele, Diaz, Alexandre P, Rodrigues, Ana Lúcia S, Peluffo, Hugo, Kaster, Manuella P

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