Qxpak: a versatile mixed model application for genetical genomics and QTL analyses von Pérez-Enciso, M., Misztal, I.

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Integrating Y-Chromosome, Mitochondrial, and Autosomal Data to Analyze the Origin of Pig Breeds von Ramírez, O., Ojeda, A., Tomàs, A., Gallardo, D., Huang, L.S., Folch, J.M., Clop, A., Sánchez, A., Badaoui, B., Hanotte, O., Galman-Omitogun, O., Makuza, S.M., Soto, H., Cadillo, J., Kelly, L., Cho, I.C., Yeghoyan, S., Pérez-Enciso, M., Amills, M.

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Genome data from a sixteenth century pig illuminate modern breed relationships von Ramírez, O, Burgos-Paz, W, Casas, E, Ballester, M, Bianco, E, Olalde, I, Santpere, G, Novella, V, Gut, M, Lalueza-Fox, C, Saña, M, Pérez-Enciso, M

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Porcine colonization of the Americas: a 60k SNP story von Burgos-Paz, W, Souza, C A, Megens, H J, Ramayo-Caldas, Y, Melo, M, Lemús-Flores, C, Caal, E, Soto, H W, Martínez, R, Alvarez, L A, Aguirre, L, Iñiguez, V, Revidatti, M A, Martínez-López, O R, Llambi, S, Esteve-Codina, A, Rodríguez, M C, Crooijmans, R P M A, Paiva, S R, Schook, L B, Groenen, M A M, Pérez-Enciso, M

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Selection in the making: a worldwide survey of haplotypic diversity around a causative mutation in porcine IGF2 von Ojeda, A, Huang, L.S, Ren, J, Angiolillo, A, Cho, I.C, Soto, H, Lemus-Flores, C, Makuza, S.M, Folch, J.M, Perez-Enciso, M

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non-synonymous mutation in a conserved site of the MTTP gene is strongly associated with protein activity and fatty acid profile in pigs von Estellé, J, Fernández, A.I, Pérez-Enciso, M, Fernández, A, Rodríguez, C, Sánchez, A, Noguera, J.L, Folch, J.M

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Worldwide genetic relationships of pigs as inferred from X chromosome SNPs von Burgos-Paz, W., Souza, C. A., Castelló, A., Mercadé, A., Okumura, N., Sheremet'eva, I. N., Huang, L. S., Cho, I. C., Paiva, S. R., Ramos-Onsins, S., Pérez-Enciso, M.

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Partial short-read sequencing of a highly inbred Iberian pig and genomics inference thereof von Esteve-Codina, A, Kofler, R, Himmelbauer, H, Ferretti, L, Vivancos, A P, Groenen, M A M, Folch, J M, Rodríguez, M C, Pérez-Enciso, M

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Characterization of the porcine acyl-CoA synthetase long-chain 4 gene and its association with growth and meat quality traits von Mercadé, A, Estellé, J, Pérez-Enciso, M, Varona, L, Silió, L, Noguera, J.L, Sánchez, A, Folch, J.M

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Building phenotype networks to improve QTL detection: a comparative analysis of fatty acid and fat traits in pigs von Yang, B., Navarro, N., Noguera, J.L., Muñoz, M., Guo, T.F., Yang, K.X., Ma, J.W., Folch, J.M., Huang, L.S., Pérez-Enciso, M.

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Multiple association analysis via simulated annealing (MASSA) von PEREZ-ENCISO, M

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Genomic relationships computed from either next‐generation sequence or array SNP data von Perez Enciso, M

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Animal Breeding learning from machine learning von Pérez‐Enciso, M.

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Evaluation of FABP2 as candidate gene for a fatty acid composition QTL in porcine chromosome 8 von Estellé, J, Mercadé, A, Pérez-Enciso, M, Pena, R.N, Silió, L, Sánchez, A, Folch, J.M

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Resequencing studies of nonmodel organisms using closely related reference genomes: optimal experimental designs and bioinformatics approaches for population genomics von Nevado, B, Ramos‐Onsins, S. E, Perez‐Enciso, M

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Atlas: A Java-Based Tool for Managing Genotypes von Pérez-Enciso, E, García-Bernal, P. G, Pérez-Enciso, M

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The chimerical genome of Isla del Coco feral pigs (Costa Rica), an isolated population since 1793 but with remarkable levels of diversity von Bianco, E., Soto, H. W., Vargas, L., Pérez-Enciso, M.

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Massive parallel sequencing in animal genetics: wherefroms and wheretos von Pérez‐Enciso, M, Ferretti, L

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The 'heritability' of domestication and its functional partitioning in the pig von Pérez-Enciso, M, de Los Campos, G, Hudson, N, Kijas, J, Reverter, A

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Pipeliner: software to evaluate the performance of bioinformatics pipelines for next-generation resequencing von Nevado, B., Perez-Enciso, M.

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