Understanding the Principles of Pattern Formation Driven by Notch Signaling by Integrating Experiments and Theoretical Models von Bocci, Federico, Onuchic, Jose Nelson, Jolly, Mohit Kumar

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A Biophysical Model Uncovers the Size Distribution of Migrating Cell Clusters across Cancer Types von Bocci, Federico, Kumar Jolly, Mohit, Onuchic, José Nelson

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Pierced Lasso Topology Controls Function in Leptin von Haglund, Ellinor, Pilko, Anna, Wollman, Roy, Jennings, Patricia Ann, Onuchic, José Nelson

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Biotin-painted proteins have thermodynamic stability switched by kinetic folding routes von Freitas, Frederico Campos, Maldonado, Michelli, Oliveira Junior, Antonio Bento, Onuchic, José Nelson, Oliveira, Ronaldo Junio de

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Toward understanding cancer stem cell heterogeneity in the tumor microenvironment von Bocci, Federico, Gearhart-Serna, Larisa, Boareto, Marcelo, Ribeiro, Mariana, Ben-Jacob, Eshel, Devi, Gayathri R., Levine, Herbert, Onuchic, José Nelson, Jolly, Mohit Kumar

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Pericytes enable effective angiogenesis in the presence of proinflammatory signals von Kang, Tae-Yun, Bocci, Federico, Jolly, Mohit Kumar, Levine, Herbert, Onuchic, José Nelson, Levchenko, Andre

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Uncovering the molecular mechanisms behind disease-associated leptin variants von Haglund, Ellinor, Nguyen, Lannie, Schafer, Nicholas Peter, Lammert, Heiko, Jennings, Patricia Ann, Onuchic, José Nelson

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The Pierced Lasso Topology Leptin has a Bolt on Dynamic Domain Composed by the Disordered Loops I and III von Danielsson, Jens, Noel, Jeffrey Kenneth, Simien, Jennifer Michelle, Duggan, Brendan Michael, Oliveberg, Mikael, Onuchic, José Nelson, Jennings, Patricia Ann, Haglund, Ellinor

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Quantitative Characteristic of ncRNA Regulation in Gene Regulatory Networks von Bocci, Federico, Jolly, Mohit Kumar, Levine, Herbert, Onuchic, José Nelson

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Folding Funnels and Frustration in Off-Lattice Minimalist Protein Landscapes von Nymeyer, Hugh, Garcia, Angel E., Onuchic, Jose Nelson

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Landscape Approaches for Determining the Ensemble of Folding Transition States: Success and Failure Hinge on the Degree of Frustration von Nymeyer, Hugh, Socci, Nicholas D., Onuchic, Jose Nelson

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A predictive theoretical model for electron tunneling pathways in proteins von Onuchic, Jose Nelson, Beratan, David N.

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Proposed Mechanism for Stability of Proteins to Evolutionary Mutations von Nelson, Erik David, Onuchic, Jose Nelson

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Contacting the Protein Folding Funnel with NMR von Onuchic, Jose Nelson

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Electron tunneling pathways in ruthenated proteins von Beratan, David N, Onuchic, Jose Nelson, Betts, Jonathan N, Bowler, Bruce E, Gray, Harry B

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Pressure-Induced Protein-Folding/Unfolding Kinetics von Hillson, Nathan, Onuchic, Jose Nelson, Garcia, Angel E.

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Dynamics of Electron Transfer Pathways in Cytochrome c Oxidase von Tan, Ming-Liang, Balabin, Ilya, Onuchic, José Nelson

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Topological and energetic factors: what determines the structural details of the transition state ensemble and “en-route” intermediates for protein folding? an investigation for sm... von Clementi, Cecilia, Nymeyer, Hugh, Onuchic, José Nelson

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Erratum: “Biotin-painted proteins have thermodynamic stability switched by kinetic folding routes” [J. Chem. Phys. 156, 195101 (2022)] von Freitas, Frederico Campos, Maldonado, Michelli, Oliveira Junior, Antonio Bento, Onuchic, José Nelson, Oliveira, Ronaldo Junio de

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Protein Folding Funnels: A Kinetic Approach to the Sequence-Structure Relationship von Leopold, Peter E., Montal, Mauricio, Onuchic, Jose Nelson

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