Saturated Fat Is More Metabolically Harmful for the Human Liver Than Unsaturated Fat or Simple Sugars von Luukkonen, Panu K, Sädevirta, Sanja, Zhou, You, Kayser, Brandon, Ali, Ashfaq, Ahonen, Linda, Lallukka, Susanna, Pelloux, Véronique, Gaggini, Melania, Jian, Ching, Hakkarainen, Antti, Lundbom, Nina, Gylling, Helena, Salonen, Anne, Orešič, Matej, Hyötyläinen, Tuulia, Orho-Melander, Marju, Rissanen, Aila, Gastaldelli, Amalia, Clément, Karine, Hodson, Leanne, Yki-Järvinen, Hannele

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Genome-wide association study of non-alcoholic fatty liver and steatohepatitis in a histologically characterised cohort von Anstee, Quentin M., Darlay, Rebecca, Cockell, Simon, Meroni, Marica, Govaere, Olivier, Tiniakos, Dina, Burt, Alastair D., Bedossa, Pierre, Palmer, Jeremy, Liu, Yang-Lin, Aithal, Guruprasad P., Allison, Michael, Yki-Järvinen, Hannele, Vacca, Michele, Dufour, Jean-Francois, Invernizzi, Pietro, Prati, Daniele, Ekstedt, Mattias, Kechagias, Stergios, Francque, Sven, Petta, Salvatore, Bugianesi, Elisabetta, Clement, Karine, Ratziu, Vlad, Schattenberg, Jörn M., Valenti, Luca, Day, Christopher P., Cordell, Heather J., Daly, Ann K.

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Interaction between dietary lipids and gut microbiota regulates hepatic cholesterol metabolism von Caesar, Robert, Nygren, Heli, Orešič, Matej, Bäckhed, Fredrik

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Simultaneous determination of perfluoroalkyl substances and bile acids in human serum using ultra-high-performance liquid chromatography–tandem mass spectrometry von Salihović, Samira, Dickens, Alex M., Schoultz, Ida, Fart, Frida, Sinisalu, Lisanna, Lindeman, Tuomas, Halfvarson, Jonas, Orešič, Matej, Hyötyläinen, Tuulia

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Metabolic Modeling of Human Gut Microbiota on a Genome Scale: An Overview von Sen, Partho, Orešič, Matej

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Optimizing the lipidomics workflow for clinical studies—practical considerations von Hyotyläinen, Tuulia, Oresic, Matej

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Informatics and computational strategies for the study of lipids von Orešič, Matej

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MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines von Burla, Bo, Arita, Makoto, Arita, Masanori, Bendt, Anne K, Cazenave-Gassiot, Amaury, Dennis, Edward A, Ekroos, Kim, Han, Xianlin, Ikeda, Kazutaka, Liebisch, Gerhard, Lin, Michelle K, Loh, Tze Ping, Meikle, Peter J, Orešič, Matej, Quehenberger, Oswald, Shevchenko, Andrej, Torta, Federico, Wakelam, Michael J O, Wheelock, Craig E, Wenk, Markus R

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Recent advances towards mass spectrometry-based clinical lipidomics von Salihovic, Samira, Lamichane, Santosh, Hyötyläinen, Tuulia, Orešič, Matej

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Lipidomes in health and disease: Analytical strategies and considerations von Wei, Fang, Lamichhane, Santosh, Orešič, Matej, Hyötyläinen, Tuulia

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Differences between human plasma and serum metabolite profiles von Yu, Zhonghao, Kastenmüller, Gabi, He, Ying, Belcredi, Petra, Möller, Gabriele, Prehn, Cornelia, Mendes, Joaquim, Wahl, Simone, Roemisch-Margl, Werner, Ceglarek, Uta, Polonikov, Alexey, Dahmen, Norbert, Prokisch, Holger, Xie, Lu, Li, Yixue, Wichmann, H-Erich, Peters, Annette, Kronenberg, Florian, Suhre, Karsten, Adamski, Jerzy, Illig, Thomas, Wang-Sattler, Rui

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Systems biology strategies to study lipidomes in health and disease von Hyötyläinen, Tuulia, Oresic, Matej

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Exposure to environmental contaminants is associated with altered hepatic lipid metabolism in non-alcoholic fatty liver disease von Sen, Partho, Qadri, Sami, Luukkonen, Panu K., Ragnarsdottir, Oddny, McGlinchey, Aidan, Jäntti, Sirkku, Juuti, Anne, Arola, Johanna, Schlezinger, Jennifer J., Webster, Thomas F., Orešič, Matej, Yki-Järvinen, Hannele, Hyötyläinen, Tuulia

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Lipidome as a predictive tool in progression to type 2 diabetes in Finnish men von Suvitaival, Tommi, Bondia-Pons, Isabel, Yetukuri, Laxman, Pöhö, Päivi, Nolan, John J., Hyötyläinen, Tuulia, Kuusisto, Johanna, Orešič, Matej

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Algorithms and tools for the preprocessing of LC–MS metabolomics data von Castillo, Sandra, Gopalacharyulu, Peddinti, Yetukuri, Laxman, Orešič, Matej

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Integrative analysis of multimodal mass spectrometry data in MZmine 3 von Schmid, Robin, Heuckeroth, Steffen, Korf, Ansgar, Smirnov, Aleksandr, Myers, Owen, Dyrlund, Thomas S., Bushuiev, Roman, Murray, Kevin J., Hoffmann, Nils, Lu, Miaoshan, Sarvepalli, Abinesh, Zhang, Zheng, Fleischauer, Markus, Dührkop, Kai, Wesner, Mark, Hoogstra, Shawn J., Rudt, Edward, Mokshyna, Olena, Brungs, Corinna, Ponomarov, Kirill, Mutabdžija, Lana, Damiani, Tito, Pudney, Chris J., Earll, Mark, Helmer, Patrick O., Fallon, Timothy R., Schulze, Tobias, Rivas-Ubach, Albert, Bilbao, Aivett, Richter, Henning, Nothias, Louis-Félix, Wang, Mingxun, Orešič, Matej, Weng, Jing-Ke, Böcker, Sebastian, Jeibmann, Astrid, Hayen, Heiko, Karst, Uwe, Dorrestein, Pieter C., Petras, Daniel, Du, Xiuxia, Pluskal, Tomáš

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1‐Deoxyceramides – Key players in lipotoxicity and progression to type 2 diabetes? von Sen, Partho, Hyötyläinen, Tuulia, Orešič, Matej

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Deep learning meets metabolomics: a methodological perspective von Sen, Partho, Lamichhane, Santosh, Mathema, Vivek B, McGlinchey, Aidan, Dickens, Alex M, Khoomrung, Sakda, Orešič, Matej

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Metabolic and phenotypic changes induced by PFAS exposure in two human hepatocyte cell models von Alijagic, Andi, Sinisalu, Lisanna, Duberg, Daniel, Kotlyar, Oleksandr, Scherbak, Nikolai, Engwall, Magnus, Orešič, Matej, Hyötyläinen, Tuulia

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Generalized theorems for nonlinear state space reconstruction von Deyle, Ethan R, Sugihara, George

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