A confidence interval analysis of sampling effort, sequencing depth, and taxonomic resolution of fungal community ecology in the era of high-throughput sequencing von Oono, Ryoko

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Plant abundance, but not plant evolutionary history, shapes patterns of host specificity in foliar fungal endophytes von Apigo, Austen, Oono, Ryoko

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The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata von Armaleo, Daniele, Müller, Olaf, Lutzoni, François, Andrésson, Ólafur S, Blanc, Guillaume, Bode, Helge B, Collart, Frank R, Dal Grande, Francesco, Dietrich, Fred, Grigoriev, Igor V, Joneson, Suzanne, Kuo, Alan, Larsen, Peter E, Logsdon, Jr, John M, Lopez, David, Martin, Francis, May, Susan P, McDonald, Tami R, Merchant, Sabeeha S, Miao, Vivian, Morin, Emmanuelle, Oono, Ryoko, Pellegrini, Matteo, Rubinstein, Nimrod, Sanchez-Puerta, Maria Virginia, Savelkoul, Elizabeth, Schmitt, Imke, Slot, Jason C, Soanes, Darren, Szövényi, Péter, Talbot, Nicholas J, Veneault-Fourrey, Claire, Xavier, Basil B

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Comparing Symbiotic Efficiency between Swollen versus Nonswollen Rhizobial Bacteroids von Oono, Ryoko, Denison, R. Ford

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The direct and interactive effects of elevated CO2 and additional nitrate on relative costs and benefits of legume-rhizobia symbiosis von Oono, Ryoko, Ho, Randy, Jimenez Salinas, Andres

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How do less‐expensive nitrogen alternatives affect legume sanctions on rhizobia? von Oono, Ryoko, Muller, Katherine E., Ho, Randy, Jimenez Salinas, Andres, Denison, Robert Ford

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Controlling the reproductive fate of rhizobia: how universal are legume sanctions von Oono, Ryoko, Denison, R. Ford, Kiers, E. Toby

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Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation von Oono, Ryoko, Schmitt, Imke, Sprent, Janet I., Denison, R. Ford

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Restoring bigcone Douglas-fir post-fire in drought-stricken Southern California: Assessing the effects of site choice and outplanting strategies von Runte, Gabriel C., Oono, Ryoko, Molinari, Nicole A., Proulx, Stephen R., D’Antonio, Carla M.

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How do phytophagous insects affect phyllosphere fungi? Tracking fungi from milkweed to monarch caterpillar frass reveals communities dominated by fungal yeast von Oono, Ryoko, Chou, Vanessa, Irving, Mari

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Distance decay relationships in foliar fungal endophytes are driven by rare taxa von Oono, Ryoko, Rasmussen, Anna, Lefèvre, Emilie

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A comparative analysis of Lophodermium fissuratum, sp. nov., found in haploxylon pine needles in the Pacific Northwest, and other Lophodermium endophytes von Salas-Lizana, Rodolfo, Oono, Ryoko

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Species diversity of fungal endophytes across a stress gradient for plants von Oono, Ryoko, Black, Danielle, Slessarev, Eric, Sickler, Burton, Strom, Amanda, Apigo, Austen

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The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered von Abarenkov, Kessy, Nilsson, R Henrik, Larsson, Karl-Henrik, Taylor, Andy F S, May, Tom W, Frøslev, Tobias Guldberg, Pawlowska, Julia, Lindahl, Björn, Põldmaa, Kadri, Truong, Camille, Vu, Duong, Hosoya, Tsuyoshi, Niskanen, Tuula, Piirmann, Timo, Ivanov, Filipp, Zirk, Allan, Peterson, Marko, Cheeke, Tanya E, Ishigami, Yui, Jansson, Arnold Tobias, Jeppesen, Thomas Stjernegaard, Kristiansson, Erik, Mikryukov, Vladimir, Miller, Joseph T, Oono, Ryoko, Ossandon, Francisco J, Paupério, Joana, Saar, Irja, Schigel, Dmitry, Suija, Ave, Tedersoo, Leho, Kõljalg, Urmas

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A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines (Pinus taeda) von Oono, Ryoko, Lefèvre, Emilie, Simha, Anita, Lutzoni, François

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Failure to fix nitrogen by non-reproductive symbiotic rhizobia triggers host sanctions that reduce fitness of their reproductive clonemates von Oono, Ryoko, Anderson, Carolyn G., Denison, R. Ford

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Patterns and Distribution of Botryosphaeriaceae Fungi Related to Dieback in Big Berry Manzanita von Drake-Schultheis, Laura, D'Antonio, Carla M., Oono, Ryoko

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Deep sequencing across multiple host species tests pine‐endophyte specificity von Sarver, Jake, Schultz, Ella, Apigo, Austen, Gernandt, David S., Salas‐Lizana, Rodolfo, Oono, Ryoko

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Sequence-based classification and identification of Fungi von Hibbett, David, Abarenkov, Kessy, Kõljalg, Urmas, Öpik, Maarja, Chai, Benli, Cole, James, Wang, Qiong, Crous, Pedro, Robert, Vincent, Helgason, Thorunn, Herr, Joshua R., Kirk, Paul, Lueschow, Shiloh, O'Donnell, Kerry, Nilsson, R. Henrik, Oono, Ryoko, Schoch, Conrad, Smyth, Christopher, Walker, Donald M., Porras-Alfaro, Andrea, Taylor, John W., Geiser, David M.

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Mechanisms of severe dieback and mortality in a classically drought‐tolerant shrubland species (Arctostaphylos glauca) von Drake‐Schultheis, Laura, Oono, Ryoko, D’Antonio, Carla M.

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