Factors driving effective population size and pan-genome evolution in bacteria von Bobay, Louis-Marie, Ochman, Howard

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Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates von Kunin, Victor, Engelbrektson, Anna, Ochman, Howard, Hugenholtz, Philip

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Evolutionary and Ecological Consequences of Gut Microbial Communities von Moran, Nancy A, Ochman, Howard, Hammer, Tobin J

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Illumina-based analysis of microbial community diversity von Degnan, Patrick H, Ochman, Howard

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Captivity and the co-diversification of great ape microbiomes von Nishida, Alex H., Ochman, Howard

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Recombination events are concentrated in the spike protein region of Betacoronaviruses von Bobay, Louis-Marie, O'Donnell, Angela C, Ochman, Howard

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The Evolution of Bacterial Genome Architecture von Bobay, Louis-Marie, Ochman, Howard

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Experimental factors affecting PCR-based estimates of microbial species richness and evenness von Engelbrektson, Anna, Kunin, Victor, Wrighton, Kelly C, Zvenigorodsky, Natasha, Chen, Feng, Ochman, Howard, Hugenholtz, Philip

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Stepwise formation of the bacterial flagellar system von Liu, Renyi, Ochman, Howard

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Conserved rates and patterns of transcription errors across bacterial growth states and lifestyles von Traverse, Charles C., Ochman, Howard

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Age of the association between Helicobacter pylori and man von Moodley, Yoshan, Linz, Bodo, Bond, Robert P, Nieuwoudt, Martin, Soodyall, Himla, Schlebusch, Carina M, Bernhöft, Steffi, Hale, James, Suerbaum, Sebastian, Mugisha, Lawrence, van der Merwe, Schalk W, Achtman, Mark

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The Ingenuity of Bacterial Genomes von Kirchberger, Paul C, Schmidt, Marian L, Ochman, Howard

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The extinction dynamics of bacterial pseudogenes von Kuo, Chih-Horng, Ochman, Howard

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Rapid changes in the gut microbiome during human evolution von Moeller, Andrew H., Li, Yingying, Ngole, Eitel Mpoudi, Ahuka-Mundeke, Steve, Lonsdorf, Elizabeth V., Pusey, Anne E., Peeters, Martine, Hahn, Beatrice H., Ochman, Howard

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Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria von Stecher, Bärbel, Chaffron, Samuel, Käppeli, Rina, Hapfelmeier, Siegfried, Freedrich, Susanne, Weber, Thomas C, Kirundi, Jorum, Suar, Mrutyunjay, McCoy, Kathy D, von Mering, Christian, Macpherson, Andrew J, Hardt, Wolf-Dietrich

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Resurrection of a global, metagenomically defined gokushovirus von Kirchberger, Paul C, Ochman, Howard

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Genome-wide detection of novel regulatory RNAs in E. coli von Raghavan, Rahul, Groisman, Eduardo A, Ochman, Howard

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Organizing the Global Diversity of Microviruses von Kirchberger, Paul C, Martinez, Zachary A, Ochman, Howard

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The Population Structure of Pseudomonas aeruginosa Is Characterized by Genetic Isolation of exoU+ and exoS+ Lineages von Ozer, Egon A, Nnah, Ekpeno, Didelot, Xavier, Whitaker, Rachel J, Hauser, Alan R

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selective force favoring increased G+C content in bacterial genes von Raghavan, Rahul, Kelkar, Yogeshwar D, Ochman, Howard

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