Acetylation of Cytidine in mRNA Promotes Translation Efficiency von Arango, Daniel, Sturgill, David, Alhusaini, Najwa, Dillman, Allissa A., Sweet, Thomas J., Hanson, Gavin, Hosogane, Masaki, Sinclair, Wilson R., Nanan, Kyster K., Mandler, Mariana D., Fox, Stephen D., Zengeya, Thomas T., Andresson, Thorkell, Meier, Jordan L., Coller, Jeffery, Oberdoerffer, Shalini

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A conserved role for intragenic DNA methylation in alternative pre-mRNA splicing von Oberdoerffer, Shalini

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mRNA 5' terminal sequences drive 200-fold differences in expression through effects on synthesis, translation and decay von van den Elzen, Antonia M G, Watson, Maegan J, Thoreen, Carson C

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Dephosphorylation of the nuclear factor of activated T cells (NFAT) transcription factor is regulated by an RNA-protein scaffold complex von Sharma, Sonia, Findlay, Gregory M, Bandukwala, Hozefa S, Oberdoerffer, Shalini, Baust, Beate, Li, Zhigang, Schmidt, Valentina, Hogan, Patrick G, Sacks, David B, Rao, Anjana

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TET-catalyzed oxidation of intragenic 5-methylcytosine regulates CTCF-dependent alternative splicing von Marina, Ryan J, Sturgill, David, Bailly, Marc A, Thenoz, Morgan, Varma, Garima, Prigge, Maria F, Nanan, Kyster K, Shukla, Sanjeev, Haque, Nazmul, Oberdoerffer, Shalini

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing von SHUKLA, Sanjeev, KAVAK, Ersen, GREGORY, Melissa, IMASHIMIZU, Masahiko, SHUTINOSKI, Bojan, KASHLEV, Mikhail, OBERDOERFFER, Philipp, SANDBERG, Rickard, OBERDOERFFER, Shalini

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Protocol for base resolution mapping of ac4C using RedaC:T-seq von Sturgill, David, Arango, Daniel, Oberdoerffer, Shalini

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Regulation of CD45 Alternative Splicing by Heterogeneous Ribonucleoprotein, hnRNPLL von Oberdoerffer, Shalini, Moita, Luis Ferreira, Neems, Daniel, Freitas, Rui P, Hacohen, Nir, Rao, Anjana

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NAT10 and cytidine acetylation in mRNA: intersecting paths in development and disease von Achour, Cyrinne, Oberdoerffer, Shalini

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ac4C: a fragile modification with stabilizing functions in RNA metabolism von Schiffers, Sarah, Oberdoerffer, Shalini

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Immunoprecipitation and Sequencing of Acetylated RNA von Arango, Daniel, Sturgill, David, Oberdoerffer, Shalini

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Rbfox1 up-regulation impairs BDNF-dependent hippocampal LTP by dysregulating TrkB isoform expression levels von Tomassoni-Ardori, Francesco, Fulgenzi, Gianluca, Becker, Jodi, Barrick, Colleen, Palko, Mary Ellen, Kuhn, Skyler, Koparde, Vishal, Cam, Maggie, Yanpallewar, Sudhirkumar, Oberdoerffer, Shalini, Tessarollo, Lino

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Co-transcriptional regulation of alternative pre-mRNA splicing von Shukla, Sanjeev, Oberdoerffer, Shalini

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Heterogeneous nuclear ribonucleoprotein L-like (hnRNPLL) and elongation factor, RNA polymerase II, 2 (ELL2) are regulators of mRNA processing in plasma cells von Benson, Micah J, Äijö, Tarmo, Chang, Xing, Gagnon, John, Pape, Utz J, Anantharaman, Vivek, Aravind, L, Pursiheimo, Juha-Pekka, Oberdoerffer, Shalini, Liu, X. Shirley, Lahesmaa, Riitta, Lähdesmäki, Harri, Rao, Anjana

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TET-Catalyzed 5-Carboxylcytosine Promotes CTCF Binding to Suboptimal Sequences Genome-wide von Nanan, Kyster K., Sturgill, David M., Prigge, Maria F., Thenoz, Morgan, Dillman, Allissa A., Mandler, Mariana D., Oberdoerffer, Shalini

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All the sites we cannot see: Sources and mitigation of false negatives in RNA modification studies von Oberdoerffer, Shalini, Gilbert, Wendy V

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing von Shukla, Sanjeev, Kavak, Ersen, Gregory, Melissa, Imashimizu, Masahiko, Shutinoski, Bojan, Kashlev, Mikhail, Oberdoerffer, Philipp, Sandberg, Rickard, Oberdoerffer, Shalini

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Meet the authors: Daniel Arango, David Sturgill, and Shalini Oberdoerffer

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Author Correction: All the sites we cannot see: Sources and mitigation of false negatives in RNA modification studies von Oberdoerffer, Shalini, Gilbert, Wendy V

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Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine von Arango, Daniel, Sturgill, David, Yang, Renbin, Kanai, Tapan, Bauer, Paulina, Roy, Jyoti, Wang, Ziqiu, Hosogane, Masaki, Schiffers, Sarah, Oberdoerffer, Shalini

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