Single-cell ATAC and RNA sequencing reveal pre-existing and persistent cells associated with prostate cancer relapse von Taavitsainen, S., Engedal, N., Cao, S., Handle, F., Erickson, A., Prekovic, S., Wetterskog, D., Tolonen, T., Vuorinen, E. M., Kiviaho, A., Nätkin, R., Häkkinen, T., Devlies, W., Henttinen, S., Kaarijärvi, R., Lahnalampi, M., Kaljunen, H., Nowakowska, K., Syvälä, H., Bläuer, M., Cremaschi, P., Claessens, F., Visakorpi, T., Tammela, T. L. J., Murtola, T., Granberg, K. J., Lamb, A. D., Ketola, K., Mills, I. G., Attard, G., Wang, W., Nykter, M., Urbanucci, A.

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Prostate cancer evolution from multilineage primary to single lineage metastases with implications for liquid biopsy von Woodcock, D. J., Riabchenko, E., Taavitsainen, S., Kankainen, M., Gundem, G., Brewer, D. S., Ellonen, P., Lepistö, M., Golubeva, Y. A., Warner, A. C., Tolonen, T., Jasu, J., Isaacs, W. B., Emmert-Buck, M. R., Nykter, M., Visakorpi, T., Bova, G. S., Wedge, D. C.

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Bioinformatics in tear proteome von Nykter, M.

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Two mature products of MIR-491 coordinate to suppress key cancer hallmarks in glioblastoma von Li, X, Liu, Y, Granberg, K J, Wang, Q, Moore, L M, Ji, P, Gumin, J, Sulman, E P, Calin, G A, Haapasalo, H, Nykter, M, Shmulevich, I, Fuller, G N, Lang, F F, Zhang, W

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Oncogenic K-Ras upregulates ITGA6 expression via FOSL1 to induce anoikis resistance and synergizes with αV-Class integrins to promote EMT von Zhang, K, Myllymäki, S-M, Gao, P, Devarajan, R, Kytölä, V, Nykter, M, Wei, G-H, Manninen, A

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IGFBP2 potentiates nuclear EGFR–STAT3 signaling von Chua, C Y, Liu, Y, Granberg, K J, Hu, L, Haapasalo, H, Annala, M J, Cogdell, D E, Verploegen, M, Moore, L M, Fuller, G N, Nykter, M, Cavenee, W K, Zhang, W

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Cabazitaxel versus abiraterone or enzalutamide in poor prognosis metastatic castration-resistant prostate cancer: a multicentre, randomised, open-label, phase II trial von Annala, M., Fu, S., Bacon, J.V.W., Sipola, J., Iqbal, N., Ferrario, C., Ong, M., Wadhwa, D., Hotte, S.J., Lo, G., Tran, B., Wood, L.A., Gingerich, J.R., North, S.A., Pezaro, C.J., Ruether, J.D., Sridhar, S.S., Kallio, H.M.L., Khalaf, D.J., Wong, A., Beja, K., Schönlau, E., Taavitsainen, S., Nykter, M., Vandekerkhove, G., Azad, A.A., Wyatt, A.W., Chi, K.N.

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Fusion genes and their discovery using high throughput sequencing von Annala, M.J, Parker, B.C, Zhang, W, Nykter, M

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Expression Analysis of Platinum Sensitive and Resistant Epithelial Ovarian Cancer Patient Samples Reveals New Candidates for Targeted Therapies von Veskimäe, K, Scaravilli, M, Niininen, W, Karvonen, H, Jaatinen, S, Nykter, M, Visakorpi, T, Mäenpää, J, Ungureanu, D, Staff, S

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Integrated RNA-seq and DNase-seq analyses identify phenotype-specific BMP4 signaling in breast cancer von Ampuja, M, Rantapero, T, Rodriguez-Martinez, A, Palmroth, M, Alarmo, E L, Nykter, M, Kallioniemi, A

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Assessment of PARP protein expression in epithelial ovarian cancer by ELISA pharmacodynamic assay and immunohistochemistry von Veskimäe, K., Staff, S., Grönholm, A., Pesu, M., Laaksonen, M., Nykter, M., Isola, J., Mäenpää, J.

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712 Processing of stacked histological tissue sections in digital pathology von Ruusuvuori, P, Nykter, M, Latonen, L

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Overexpression of SNORD114-3 marks acute promyelocytic leukemia von Liuksiala, T, Teittinen, K J, Granberg, K, Heinäniemi, M, Annala, M, Mäki, M, Nykter, M, Lohi, O

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Biological Information as Set-Based Complexity von Galas, D.J., Nykter, M., Carter, G.W., Price, N.D., Shmulevich, I.

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Quality characteristics of edible linseed oil von Nykter, Minna, Kymäläinen, Hanna-Riitta, Gates, Fred, Sjöberg, Anna-Maija

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A prostate cancer susceptibility allele at 6q22 increases RFX6 expression by modulating HOXB13 chromatin binding von Huang, Qilai, Whitington, Thomas, Gao, Ping, Lindberg, Johan F, Yang, Yuehong, Sun, Jielin, Väisänen, Marja-Riitta, Szulkin, Robert, Annala, Matti, Yan, Jian, Egevad, Lars A, Zhang, Kai, Lin, Ruizhu, Jolma, Arttu, Nykter, Matti, Manninen, Aki, Wiklund, Fredrik, Vaarala, Markku H, Visakorpi, Tapio, Xu, Jianfeng, Taipale, Jussi, Wei, Gong-Hong

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Ageing-associated changes in the human DNA methylome: genomic locations and effects on gene expression von Marttila, Saara, Kananen, Laura, Häyrynen, Sergei, Jylhävä, Juulia, Nevalainen, Tapio, Hervonen, Antti, Jylhä, Marja, Nykter, Matti, Hurme, Mikko

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Genetic and Epigenetic Characteristics of Inflammatory Bowel Disease–Associated Colorectal Cancer von Rajamäki, Kristiina, Taira, Aurora, Katainen, Riku, Välimäki, Niko, Kuosmanen, Anna, Plaketti, Roosa-Maria, Seppälä, Toni T., Ahtiainen, Maarit, Wirta, Erkki-Ville, Vartiainen, Emilia, Sulo, Päivi, Ravantti, Janne, Lehtipuro, Suvi, Granberg, Kirsi J., Nykter, Matti, Tanskanen, Tomas, Ristimäki, Ari, Koskensalo, Selja, Renkonen-Sinisalo, Laura, Lepistö, Anna, Böhm, Jan, Taipale, Jussi, Mecklin, Jukka-Pekka, Aavikko, Mervi, Palin, Kimmo, Aaltonen, Lauri A.

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P10.15.A THE ROLE OF NONCODING RNAS IN THE PROGRESSION OF IDH-MUTANT ASTROCYTOMAS TO GRADE 4 von Hartewig, A, Jaatinen, S, Annala, M, Helén, P, Haapasalo, J, Zhang, W, Haapasalo, H, Nykter, M, Rautajoki, K J

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Crosstalk between ROR1 and BCR pathways defines novel treatment strategies in mantle cell lymphoma von Karvonen, Hanna, Chiron, David, Niininen, Wilhelmiina, Ek, Sara, Jerkeman, Mats, Moradi, Elaheh, Nykter, Matti, Heckman, Caroline A., Kallioniemi, Olli, Murumägi, Astrid, Ungureanu, Daniela

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