The Paragon Algorithm, a Next Generation Search Engine That Uses Sequence Temperature Values and Feature Probabilities to Identify Peptides from Tandem Mass Spectra von Shilov, Ignat V., Seymour, Sean L., Patel, Alpesh A., Loboda, Alex, Tang, Wilfred H., Keating, Sean P., Hunter, Christie L., Nuwaysir, Lydia M., Schaeffer, Daniel A.

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Discovering Known and Unanticipated Protein Modifications Using MS/MS Database Searching von Tang, Wilfred H, Halpern, Benjamin R, Shilov, Ignat V, Seymour, Sean L, Keating, Sean P, Loboda, Alex, Patel, Alpesh A, Schaeffer, Daniel A, Nuwaysir, Lydia M

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A cross-platform toolkit for mass spectrometry and proteomics von Chambers, Matthew C, Maclean, Brendan, Burke, Robert, Amodei, Dario, Ruderman, Daniel L, Neumann, Steffen, Gatto, Laurent, Fischer, Bernd, Pratt, Brian, Egertson, Jarrett, Hoff, Katherine, Kessner, Darren, Tasman, Natalie, Shulman, Nicholas, Frewen, Barbara, Baker, Tahmina A, Brusniak, Mi-Youn, Paulse, Christopher, Creasy, David, Flashner, Lisa, Kani, Kian, Moulding, Chris, Seymour, Sean L, Nuwaysir, Lydia M, Lefebvre, Brent, Kuhlmann, Frank, Roark, Joe, Rainer, Paape, Detlev, Suckau, Hemenway, Tina, Huhmer, Andreas, Langridge, James, Connolly, Brian, Chadick, Trey, Holly, Krisztina, Eckels, Josh, Deutsch, Eric W, Moritz, Robert L, Katz, Jonathan E, Agus, David B, MacCoss, Michael, Tabb, David L, Mallick, Parag

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Electrospray ionization mass spectrometry of phosphopeptides isolated by on-line immobilized metal-ion affinity chromatography von Nuwaysir, Lydia M., Stults, John T.

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The Catalytic Subunit of the cAMP-dependent Protein Kinase of Ovine Sperm Flagella Has a Unique Amino-terminal Sequence von Agustin, Jovenal T. San, Leszyk, John D., Nuwaysir, Lydia M., Witman, George B.

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Identification of the photocrosslinking sites in troponin-I with 4-maleimidobenzophenone labelled mutant troponin-Cs having single cysteines at positions 158 and 21 von Leszyk, J, Tao, T, Nuwaysir, L M, Gergely, J

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Comparative study of photodissociation and surface-induced dissociation by laser desorption Fourier transform mass spectrometry von Castoro, John A, Nuwaysir, Lydia M, Ijames, Carl F, Wilkins, Charles L

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Analysis of copolymers by laser desorption fourier transform mass spectrometry von Nuwaysir, Lydia M., Wilkins, Charles L., Simonsick, William J.

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Gas-phase host-guest chemistry of carcerands and hemicarcerands von Nuwaysir, Lydia M, Castoro, John A, Yang, Cathy Liub Chii, Wilkins, Charles L

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Laser desorption Fourier transform mass spectrometry of polymers: comparison with secondary ion and fast atom bombardment mass spectrometry von Nuwaysir, Lydia M, Wilkins, Charles L

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Photodissociation of laser-desorbed ions as a structure determination tool von Nuwaysir, Lydia M, Wilkins, Charles L

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Laser Desorption Mass Spectrometry of Chemically and Electrochemically Prepared Poly(2-vinylthiophene) von O'Malley, Rebecca M, Randazzo, Michael E, Weinzierl, Jon E, Fernandez, Jack E, Nuwaysir, Lydia M, Castoro, John A, Wilkins, Charles L

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Electrochemical polymerization of 4-methyl-4'-vinyl-2,2'-bipyridine-containing metal complexes: polymer structure and mechanism of formation von Elliott, C. Michael, Baldy, Christopher J, Nuwaysir, Lydia M, Wilkins, Charles L

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Fourier transform mass spectrometry: Current status von Wilkins, Charles L., Chowdhury, A. Kasem, Nuwaysir, Lydia M., Coates, Mildred L.

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Characterization of Protein Digests Using Novel Mixed-mode Scanning with a Single Quadrupole Instrument von Allen, Mark, Anacleto, Joseph, Bonner, Ron, Bonnici, Pauline, Shushan, Bori, Nuwaysir, Lydia

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