ColiSeq: a multiplex amplicon assay that provides strain level resolution of Escherichia coli directly from clinical specimens von Williamson, Charles H D, Vazquez, Adam J, Nunnally, Amalee E, Kyger, Kristen, Fofanov, Viacheslav Y, Furstenau, Tara N, Hornstra, Heidie M, Terriquez, Joel, Keim, Paul, Sahl, Jason W

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Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins von Stone, Nathan E., Nunnally, Amalee E., Jimenez, Victor, Cope, Emily K., Sahl, Jason W., Sheridan, Krystal, Hornstra, Heidie M., Vinocur, Jacob, Settles, Erik W., Headley, Kyle C., Williamson, Charles H.D., Rideout, Jai Ram, Bolyen, Evan, Caporaso, J. Gregory, Terriquez, Joel, Monroy, Fernando P., Busch, Joseph D., Keim, Paul, Wagner, David M.

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Identification of novel, cryptic Clostridioides species isolates from environmental samples collected from diverse geographical locations von Williamson, Charles Hall Davis, Stone, Nathan E, Nunnally, Amalee E, Roe, Chandler C, Vazquez, Adam J, Lucero, Samantha A, Hornstra, Heidie, Wagner, David M, Keim, Paul, Rupnik, Maja, Janezic, Sandra, Sahl, Jason William

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A local-scale One Health genomic surveillance of Clostridioides difficile demonstrates highly related strains from humans, canines, and the environment von Williamson, Charles H D, Roe, Chandler C, Terriquez, Joel, Hornstra, Heidie, Lucero, Samantha, Nunnally, Amalee E, Vazquez, Adam J, Vinocur, Jacob, Plude, Carmel, Nienstadt, Linus, Stone, Nathan E, Celona, Kimberly R, Wagner, David M, Keim, Paul, Sahl, Jason W

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Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019 von Stone, Nathan E, Nunnally, Amalee E, Roe, Chandler C, Hornstra, Heidie M, Wagner, David M, Sahl, Jason W

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A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network von Williamson, Charles H D, Stone, Nathan E, Nunnally, Amalee E, Hornstra, Heidie M, Wagner, David M, Roe, Chandler C, Vazquez, Adam J, Nandurkar, Nivedita, Vinocur, Jacob, Terriquez, Joel, Gillece, John, Travis, Jason, Lemmer, Darrin, Keim, Paul, Sahl, Jason W

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A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network von Williamson, Charles H.D., Stone, Nathan E., Amalee E. Nunnally, Hornstra, Heidie M., Wagner, David M., Roe, Chandler C., Vazquez, Adam J., Nivedita Nandurkar, Vinocur, Jacob, Terriquez, Joel, Gillece, John, Travis, Jason, Lemmer, Darrin, Keim, Paul, Sahl, Jason W.

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